RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PRDM6Q9NQX0 595 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 KBTBD4Q9NVX7 518 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 SNTG2Q9NY99 539 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 DNAJB4Q9UDY4 337 aa17.41■□□□□ 0.38
ERCC3-206ENST00000462306 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 PLXNA4Q9HCM2 1894 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 ZC3H11AO75152 810 aaKnown RBP eCLIP17.4■□□□□ 0.38
ERCC3-206ENST00000462306 SCP2P22307 547 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 NMT1P30419 496 aaKnown RBP17.4■□□□□ 0.38
ERCC3-206ENST00000462306 PPM1AP35813 382 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 SCNN1GP51170 649 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 PLCB3Q01970 1234 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 UBE3AQ05086 875 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 RNASELQ05823 741 aaKnown RBP17.4■□□□□ 0.38
ERCC3-206ENST00000462306 STRN3Q13033 797 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 DHX58Q96C10 678 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 CDT1Q9H211 546 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 SPG21Q9NZD8 308 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 KLK14Q9P0G3 267 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 PARP2Q9UGN5 583 aa17.4■□□□□ 0.38
ERCC3-206ENST00000462306 ATG2AQ2TAZ0 1938 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 FRMD3A2A2Y4 597 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 NT5C1B-RDH14C9J2C7 533 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 K7ENM7 598 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 POLR2DO15514 142 aaKnown RBP17.39■□□□□ 0.37
ERCC3-206ENST00000462306 RECQL4O94761 1208 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 GALTP07902 379 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 IRS1P35568 1242 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 SLC11A1P49279 550 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 ALDH7A1P49419 539 aaKnown RBP17.39■□□□□ 0.37
ERCC3-206ENST00000462306 GTF2BQ00403 316 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 DSC1Q08554 894 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 ZNF568Q3ZCX4 644 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 TIGD5Q53EQ6 642 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 ADALQ6DHV7 355 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 ZPBP2Q6X784 338 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 TMEM173Q86WV6 379 aaPredicted RBP17.39■□□□□ 0.37
ERCC3-206ENST00000462306 SFR1Q86XK3 245 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 FAM178BQ8IXR5 827 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 MRPS27Q92552 414 aaKnown RBP17.39■□□□□ 0.37
ERCC3-206ENST00000462306 STAMQ92783 540 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 ZBTB45Q96K62 511 aaPredicted RBP17.39■□□□□ 0.37
ERCC3-206ENST00000462306 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
ERCC3-206ENST00000462306 GBP3Q9H0R5 595 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 CXCL16Q9H2A7 254 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 TNMDQ9H2S6 317 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 ST6GALNAC4Q9H4F1 302 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 TBX20Q9UMR3 447 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 LZTS1Q9Y250 596 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 MYO7AQ13402 2215 aa17.39■□□□□ 0.37
ERCC3-206ENST00000462306 TOM1L1O75674 476 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 MCF2P10911 925 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 GAP43P17677 238 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 CMA1P23946 247 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 ERVFC1P60507 584 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 TCEAL5Q5H9L2 206 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 MPZL3Q6UWV2 235 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 ZNF720Q7Z2F6 126 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 APBB1IPQ7Z5R6 666 aaPredicted RBP17.38■□□□□ 0.37
ERCC3-206ENST00000462306 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 CEP120Q8N960 986 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 BCL7CQ8WUZ0 217 aaPredicted RBP17.38■□□□□ 0.37
ERCC3-206ENST00000462306 TMEM175Q9BSA9 504 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 NSUN3Q9H649 340 aaKnown RBP17.38■□□□□ 0.37
ERCC3-206ENST00000462306 SEL1LQ9UBV2 794 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 KCNH3Q9ULD8 1083 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 GDAQ9Y2T3 454 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 REV3LO60673 3130 aa17.38■□□□□ 0.37
ERCC3-206ENST00000462306 PRUNE2Q8WUY3 3088 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 TCHHQ07283 1943 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 CARNS1A5YM72 827 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 PTGESO14684 152 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 PPP1R37O75864 691 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 CSPG5O95196 566 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 PIGRP01833 764 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 GRM5P41594 1212 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 KRT17Q04695 432 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 ZC2HC1CQ53FD0 456 aaPredicted RBP17.37■□□□□ 0.37
ERCC3-206ENST00000462306 CNNM4Q6P4Q7 775 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 ZBTB33Q86T24 672 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 MAP4K3Q8IVH8 894 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 SLC17A8Q8NDX2 589 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 IGSF21Q96ID5 467 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 FAM193BQ96PV7 902 aaPredicted RBP17.37■□□□□ 0.37
ERCC3-206ENST00000462306 TCHPQ9BT92 498 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 STRA6Q9BX79 667 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 TRIM9Q9C026 710 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 HAPLN2Q9GZV7 340 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 GDPD2Q9HCC8 539 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 TLR9Q9NR96 1032 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 HPSEQ9Y251 543 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 PCDHGC5Q9Y5F6 944 aa17.37■□□□□ 0.37
ERCC3-206ENST00000462306 FAM237AA0A1B0GTK4 181 aa17.36■□□□□ 0.37
ERCC3-206ENST00000462306 A0A1B0GVL5 298 aa17.36■□□□□ 0.37
ERCC3-206ENST00000462306 NRP1O14786 923 aa17.36■□□□□ 0.37
ERCC3-206ENST00000462306 FSCN2O14926 492 aa17.36■□□□□ 0.37
ERCC3-206ENST00000462306 ALDH2P05091 517 aa17.36■□□□□ 0.37
ERCC3-206ENST00000462306 IDEP14735 1019 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms