RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 KIAA0355O15063 1070 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 CLIC2O15247 247 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 STX10O60499 249 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 CLTAP09496 248 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 CTSHP09668 335 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 KRT13P13646 458 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 MATR3P43243 847 aaKnown RBP eCLIP11.64□□□□□ -0.55
RTF1-202ENST00000462276 PAK2Q13177 524 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 LPIN1Q14693 890 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 ZNF568Q3ZCX4 644 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 FILIP1LQ4L180 1135 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 CEP135Q66GS9 1140 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 SLC39A4Q6P5W5 647 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 SARM1Q6SZW1 724 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 FAM228AQ86W67 206 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 IRF2BP1Q8IU81 584 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 FAM186BQ8IYM0 893 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 TMEM40Q8WWA1 233 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 ZNF668Q96K58 619 aaPredicted RBP11.64□□□□□ -0.55
RTF1-202ENST00000462276 PPP1R16BQ96T49 567 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 HTATIP2Q9BUP3 242 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 HSD3B7Q9H2F3 369 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 PDZD7Q9H5P4 517 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 PLEKHA5Q9HAU0 1116 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 GRPEL1Q9HAV7 217 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 ERVK-5Q9HDB9 667 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 SAMSN1Q9NSI8 373 aaKnown RBP11.64□□□□□ -0.55
RTF1-202ENST00000462276 LIMA1Q9UHB6 759 aaKnown RBP11.64□□□□□ -0.55
RTF1-202ENST00000462276 ST3GAL5Q9UNP4 418 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 ATP11BQ9Y2G3 1177 aa11.64□□□□□ -0.55
RTF1-202ENST00000462276 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.64□□□□□ -0.55
RTF1-202ENST00000462276 WDR81Q562E7 1941 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 KCNJ18B7U540 433 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 ABLIM1O14639 778 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 B4GALT5O43286 388 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 CBFA2T2O43439 604 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 ZNF623O75123 536 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 AKAP3O75969 853 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 RAB27AP51159 221 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 CYP2J2P51589 502 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 AP3M2P53677 418 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 NFX1Q12986 1120 aaKnown RBP11.63□□□□□ -0.55
RTF1-202ENST00000462276 KCNJ12Q14500 433 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 SNRNP35Q16560 246 aaKnown RBP11.63□□□□□ -0.55
RTF1-202ENST00000462276 LRRC26Q2I0M4 334 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 CCDC40Q4G0X9 1142 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 CD302Q8IX05 232 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 RSPH1Q8WYR4 309 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 SEPT8Q92599 483 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 ANP32BQ92688 251 aaKnown RBP11.63□□□□□ -0.55
RTF1-202ENST00000462276 BORCS6Q96GS4 357 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 MFSD14AQ96MC6 490 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 ANKFY1Q9P2R3 1169 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 PADI3Q9ULW8 664 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 PIN4Q9Y237 131 aaKnown RBP11.63□□□□□ -0.55
RTF1-202ENST00000462276 KAT6AQ92794 2004 aa11.63□□□□□ -0.55
RTF1-202ENST00000462276 CSDE1O75534 798 aaKnown RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 SERPINC1P01008 464 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 TIMP1P01033 207 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 CXCL10P02778 98 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 PFKMP08237 780 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 GHRP10912 638 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 GTF2H1P32780 548 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 GRM5P41594 1212 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 MTIF2P46199 727 aaKnown RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 TRIM59Q8IWR1 403 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 RPUSD2Q8IZ73 545 aaKnown RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 ZBTB45Q96K62 511 aaPredicted RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 CNOT6LQ96LI5 555 aaKnown RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 FAM213AQ9BRX8 229 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 TUBGCP2Q9BSJ2 902 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 CCDC94Q9BW85 323 aaPredicted RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 IFIH1Q9BYX4 1025 aaKnown RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 TRIM6Q9C030 488 aaPredicted RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 CDT1Q9H211 546 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 PCIF1Q9H4Z3 704 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 ASB7Q9H672 318 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 AGO3Q9H9G7 860 aaKnown RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 UBN1Q9NPG3 1134 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 TOPORSQ9NS56 1045 aaPredicted RBP11.62□□□□□ -0.55
RTF1-202ENST00000462276 C1orf112Q9NSG2 853 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 PRKAG2Q9UGJ0 569 aa11.62□□□□□ -0.55
RTF1-202ENST00000462276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.62□□□□□ -0.55
RTF1-202ENST00000462276 A0A0U1RQF3 1178 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 TISP43B9A030 160 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 PMM2O15305 246 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 P4HA2O15460 535 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 FAM189A1O60320 539 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 EFCAB14O75071 495 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 N4BP1O75113 896 aaKnown RBP11.61□□□□□ -0.55
RTF1-202ENST00000462276 IL18RAPO95256 599 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 EDN1P05305 212 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 ADRB2P07550 413 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 CD52P31358 61 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 CASP4P49662 377 aa11.61□□□□□ -0.55
RTF1-202ENST00000462276 VAMP7P51809 220 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms