RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 JPH2Q9BR39 696 aaPredicted RBP17.1■□□□□ 0.33
APP-211ENST00000462267 FBXW11Q9UKB1 542 aa17.1■□□□□ 0.33
APP-211ENST00000462267 CEP295Q9C0D2 2601 aa17.1■□□□□ 0.33
APP-211ENST00000462267 WDR81Q562E7 1941 aa17.09■□□□□ 0.33
APP-211ENST00000462267 ESYT2A0FGR8 921 aa17.09■□□□□ 0.33
APP-211ENST00000462267 ARL5CA6NH57 179 aa17.09■□□□□ 0.33
APP-211ENST00000462267 CHMP2AO43633 222 aa17.09■□□□□ 0.33
APP-211ENST00000462267 GAS7O60861 476 aa17.09■□□□□ 0.33
APP-211ENST00000462267 XYLBO75191 536 aa17.09■□□□□ 0.33
APP-211ENST00000462267 STBD1O95210 358 aa17.09■□□□□ 0.33
APP-211ENST00000462267 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
APP-211ENST00000462267 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
APP-211ENST00000462267 HOXA9P31269 272 aa17.09■□□□□ 0.33
APP-211ENST00000462267 ACAP1Q15027 740 aa17.09■□□□□ 0.33
APP-211ENST00000462267 LIN9Q5TKA1 542 aa17.09■□□□□ 0.33
APP-211ENST00000462267 FUT10Q6P4F1 479 aa17.09■□□□□ 0.33
APP-211ENST00000462267 APOA5Q6Q788 366 aa17.09■□□□□ 0.33
APP-211ENST00000462267 PRR23BQ6ZRT6 265 aa17.09■□□□□ 0.33
APP-211ENST00000462267 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
APP-211ENST00000462267 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
APP-211ENST00000462267 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
APP-211ENST00000462267 GPR62Q9BZJ7 368 aa17.09■□□□□ 0.33
APP-211ENST00000462267 CHRDQ9H2X0 955 aa17.09■□□□□ 0.33
APP-211ENST00000462267 FASNP49327 2511 aaKnown RBP17.09■□□□□ 0.33
APP-211ENST00000462267 DOCK6Q96HP0 2047 aa17.08■□□□□ 0.33
APP-211ENST00000462267 F8W810 466 aa17.08■□□□□ 0.32
APP-211ENST00000462267 MSH4O15457 936 aa17.08■□□□□ 0.32
APP-211ENST00000462267 KCNA4P22459 653 aa17.08■□□□□ 0.32
APP-211ENST00000462267 RTN1Q16799 776 aa17.08■□□□□ 0.32
APP-211ENST00000462267 PPM1LQ5SGD2 360 aa17.08■□□□□ 0.32
APP-211ENST00000462267 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
APP-211ENST00000462267 N4BP2L1Q5TBK1 243 aaPredicted RBP17.08■□□□□ 0.32
APP-211ENST00000462267 IL31Q6EBC2 164 aa17.08■□□□□ 0.32
APP-211ENST00000462267 SMG8Q8ND04 991 aaKnown RBP17.08■□□□□ 0.32
APP-211ENST00000462267 ITFG1Q8TB96 612 aa17.08■□□□□ 0.32
APP-211ENST00000462267 GAD1Q99259 594 aa17.08■□□□□ 0.32
APP-211ENST00000462267 TEKT3Q9BXF9 490 aa17.08■□□□□ 0.32
APP-211ENST00000462267 LRRC2Q9BYS8 371 aa17.08■□□□□ 0.32
APP-211ENST00000462267 ZMYND12Q9H0C1 365 aa17.08■□□□□ 0.32
APP-211ENST00000462267 UNC45AQ9H3U1 944 aa17.08■□□□□ 0.32
APP-211ENST00000462267 C6orf50Q9HD87 102 aa17.08■□□□□ 0.32
APP-211ENST00000462267 KCNH3Q9ULD8 1083 aa17.08■□□□□ 0.32
APP-211ENST00000462267 COL4A3BPQ9Y5P4 624 aa17.08■□□□□ 0.32
APP-211ENST00000462267 ANKRD11Q6UB99 2663 aaPredicted RBP17.08■□□□□ 0.32
APP-211ENST00000462267 PKD1L2Q7Z442 2459 aa17.07■□□□□ 0.32
APP-211ENST00000462267 TMEM150BA6NC51 233 aa17.07■□□□□ 0.32
APP-211ENST00000462267 MAN2B1O00754 1011 aa17.07■□□□□ 0.32
APP-211ENST00000462267 GDF9O60383 454 aa17.07■□□□□ 0.32
APP-211ENST00000462267 ECI2O75521 394 aa17.07■□□□□ 0.32
APP-211ENST00000462267 IGHDP01880 384 aa17.07■□□□□ 0.32
APP-211ENST00000462267 PROS1P07225 676 aa17.07■□□□□ 0.32
APP-211ENST00000462267 C8AP07357 584 aa17.07■□□□□ 0.32
APP-211ENST00000462267 POU2F2P09086 479 aa17.07■□□□□ 0.32
APP-211ENST00000462267 MLH1P40692 756 aa17.07■□□□□ 0.32
APP-211ENST00000462267 SCNN1GP51170 649 aa17.07■□□□□ 0.32
APP-211ENST00000462267 CCR3P51677 355 aa17.07■□□□□ 0.32
APP-211ENST00000462267 SIM2Q14190 667 aaPredicted RBP17.07■□□□□ 0.32
APP-211ENST00000462267 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
APP-211ENST00000462267 NPAS3Q8IXF0 933 aa17.07■□□□□ 0.32
APP-211ENST00000462267 DNASE1L2Q92874 299 aa17.07■□□□□ 0.32
APP-211ENST00000462267 SLC5A5Q92911 643 aa17.07■□□□□ 0.32
APP-211ENST00000462267 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
APP-211ENST00000462267 HEBP1Q9NRV9 189 aa17.07■□□□□ 0.32
APP-211ENST00000462267 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
APP-211ENST00000462267 POLIQ9UNA4 740 aa17.07■□□□□ 0.32
APP-211ENST00000462267 IPPQ9Y573 584 aa17.07■□□□□ 0.32
APP-211ENST00000462267 F5P12259 2224 aa17.06■□□□□ 0.32
APP-211ENST00000462267 SHISA7A6NL88 538 aa17.06■□□□□ 0.32
APP-211ENST00000462267 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
APP-211ENST00000462267 MIER3Q7Z3K6 550 aa17.06■□□□□ 0.32
APP-211ENST00000462267 ZNF687Q8N1G0 1237 aa17.06■□□□□ 0.32
APP-211ENST00000462267 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
APP-211ENST00000462267 MINDY3Q9H8M7 445 aa17.06■□□□□ 0.32
APP-211ENST00000462267 MIOSQ9NXC5 875 aa17.06■□□□□ 0.32
APP-211ENST00000462267 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
APP-211ENST00000462267 ADAMTS3O15072 1205 aa17.05■□□□□ 0.32
APP-211ENST00000462267 CCL16O15467 120 aa17.05■□□□□ 0.32
APP-211ENST00000462267 ZBTB43O43298 467 aa17.05■□□□□ 0.32
APP-211ENST00000462267 GNA11P29992 359 aa17.05■□□□□ 0.32
APP-211ENST00000462267 CNR2P34972 360 aa17.05■□□□□ 0.32
APP-211ENST00000462267 LIMK1P53667 647 aa17.05■□□□□ 0.32
APP-211ENST00000462267 PRSS55Q6UWB4 352 aaPredicted RBP17.05■□□□□ 0.32
APP-211ENST00000462267 CCDC51Q96ER9 411 aa17.05■□□□□ 0.32
APP-211ENST00000462267 ZFP42Q96MM3 310 aa17.05■□□□□ 0.32
APP-211ENST00000462267 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
APP-211ENST00000462267 GDE1Q9NZC3 331 aa17.05■□□□□ 0.32
APP-211ENST00000462267 NDRG2Q9UN36 371 aaKnown RBP17.05■□□□□ 0.32
APP-211ENST00000462267 GIT1Q9Y2X7 761 aa17.05■□□□□ 0.32
APP-211ENST00000462267 ZFYVE26Q68DK2 2539 aa17.05■□□□□ 0.32
APP-211ENST00000462267 SF3B1O75533 1304 aaKnown RBP eCLIP17.04■□□□□ 0.32
APP-211ENST00000462267 TADA2AO75478 443 aa17.04■□□□□ 0.32
APP-211ENST00000462267 PSMD10O75832 226 aa17.04■□□□□ 0.32
APP-211ENST00000462267 SRGAP2CP0DJJ0 459 aa17.04■□□□□ 0.32
APP-211ENST00000462267 AXLP30530 894 aa17.04■□□□□ 0.32
APP-211ENST00000462267 USP11P51784 963 aa17.04■□□□□ 0.32
APP-211ENST00000462267 PCBP1Q15365 356 aaKnown RBP eCLIP17.04■□□□□ 0.32
APP-211ENST00000462267 UVSSAQ2YD98 709 aa17.04■□□□□ 0.32
APP-211ENST00000462267 PABPC1LQ4VXU2 614 aaKnown RBP17.04■□□□□ 0.32
APP-211ENST00000462267 RTP2Q5QGT7 225 aa17.04■□□□□ 0.32
APP-211ENST00000462267 ANO5Q75V66 913 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms