RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 PLCD3Q8N3E9 789 aa17.16■□□□□ 0.34
SF3A3-203ENST00000461869 RIT2Q99578 217 aa17.16■□□□□ 0.34
SF3A3-203ENST00000461869 UNC45AQ9H3U1 944 aa17.16■□□□□ 0.34
SF3A3-203ENST00000461869 MFSD1Q9H3U5 465 aa17.16■□□□□ 0.34
SF3A3-203ENST00000461869 ZDBF2Q9HCK1 2354 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 CARNS1A5YM72 827 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 SKIP12755 728 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 STAT6P42226 847 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 GSE1Q14687 1217 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 LONRF3Q496Y0 759 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 MTERF2Q49AM1 385 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 LRCH2Q5VUJ6 765 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 TWF2Q6IBS0 349 aaKnown RBP17.15■□□□□ 0.34
SF3A3-203ENST00000461869 USP49Q70CQ1 688 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 PDILTQ8N807 584 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 SNX29Q8TEQ0 813 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 SLC22A17Q8WUG5 538 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 RSPH1Q8WYR4 309 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 SLC5A5Q92911 643 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 LPPQ93052 612 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 DHX58Q96C10 678 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 IGSF21Q96ID5 467 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 TEKT3Q9BXF9 490 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 SEPT9Q9UHD8 586 aaPredicted RBP17.15■□□□□ 0.34
SF3A3-203ENST00000461869 USTQ9Y2C2 406 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 IRAK3Q9Y616 596 aa17.15■□□□□ 0.34
SF3A3-203ENST00000461869 A0A087WZ62 844 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 POTEMA6NI47 508 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 ACTN4O43707 911 aaKnown RBP17.14■□□□□ 0.33
SF3A3-203ENST00000461869 GALTP07902 379 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 SFPQP23246 707 aaKnown RBP eCLIP17.14■□□□□ 0.33
SF3A3-203ENST00000461869 DNM2P50570 870 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 RNASELQ05823 741 aaKnown RBP17.14■□□□□ 0.33
SF3A3-203ENST00000461869 ZRSR1Q15695 479 aaKnown RBP17.14■□□□□ 0.33
SF3A3-203ENST00000461869 NOMO2Q5JPE7 1267 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 RRAGBQ5VZM2 374 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 SASS6Q6UVJ0 657 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 GLB1LQ6UWU2 654 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 TMC5Q6UXY8 1006 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 KCTD17Q8N5Z5 321 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 GJA10Q969M2 543 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 FDXACB1Q9BRP7 624 aaPredicted RBP17.14■□□□□ 0.33
SF3A3-203ENST00000461869 TRAIPQ9BWF2 469 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 NIFKQ9BYG3 293 aaKnown RBP17.14■□□□□ 0.33
SF3A3-203ENST00000461869 NT5C3AQ9H0P0 336 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 NRDE2Q9H7Z3 1164 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 CYP26B1Q9NR63 512 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 TBC1D13Q9NVG8 400 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 STK17AQ9UEE5 414 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 INPP5FQ9Y2H2 1132 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 USP34Q70CQ2 3546 aa17.14■□□□□ 0.33
SF3A3-203ENST00000461869 NBL1P41271 181 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 CLCN5P51795 746 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 PPP2R5CQ13362 524 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 KARSQ15046 597 aaKnown RBP17.13■□□□□ 0.33
SF3A3-203ENST00000461869 E2F4Q16254 413 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 XKR3Q5GH77 459 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 MIER3Q7Z3K6 550 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 PPFIBP1Q86W92 1011 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 RDM1Q8NG50 284 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 BCL7CQ8WUZ0 217 aaPredicted RBP17.13■□□□□ 0.33
SF3A3-203ENST00000461869 SH2D3AQ9BRG2 576 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
SF3A3-203ENST00000461869 FAM105AQ9NUU6 356 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
SF3A3-203ENST00000461869 SERTAD1Q9UHV2 236 aa17.13■□□□□ 0.33
SF3A3-203ENST00000461869 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
SF3A3-203ENST00000461869 PLXNA3P51805 1871 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 IGKV6-21A0A0C4DH24 114 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 TMEM150BA6NC51 233 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 PRR23AA6NEV1 266 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 MEIS3P2A8K0S8 358 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 PP2D1A8MPX8 630 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 OFD1O75665 1012 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 PSMD10O75832 226 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 MYL1P05976 194 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 SPIRE1Q08AE8 756 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 POSTNQ15063 836 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 ZNF410Q86VK4 478 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 RHPN2Q8IUC4 686 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 FLCNQ8NFG4 579 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 FEZF2Q8TBJ5 459 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 ACSF2Q96CM8 615 aaPredicted RBP17.12■□□□□ 0.33
SF3A3-203ENST00000461869 CEP89Q96ST8 783 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 GBP3Q9H0R5 595 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 TSPY26PQ9H489 355 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 SFXN1Q9H9B4 322 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 DNAJB4Q9UDY4 337 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
SF3A3-203ENST00000461869 A0A087X0B3 334 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 STBD1O95210 358 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 SMC2O95347 1197 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 PLCG1P19174 1290 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 MUTP22033 750 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 CDC25AP30304 524 aa17.11■□□□□ 0.33
SF3A3-203ENST00000461869 CCT6AP40227 531 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms