RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 TET1Q8NFU7 2136 aa16.6■□□□□ 0.25
TMEM39A-203ENST00000461654 SMIM35A0A1B0GVV1 85 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 GOLGA6L6A8MZA4 724 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 TGFB1I1O43294 461 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 AP5Z1O43299 807 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 CA3P07451 260 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 EPB41P11171 864 aaKnown RBP16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 POU5F1BQ06416 359 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 MARCH8Q5T0T0 291 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 LRRC55Q6ZSA7 311 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 KCNN1Q92952 543 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 NLRP4Q96MN2 994 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 AGPAT3Q9NRZ7 376 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 FRMD4BQ9Y2L6 1034 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 ZMYM2Q9UBW7 1377 aa16.59■□□□□ 0.25
TMEM39A-203ENST00000461654 PES1O00541 588 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 HNRNPDLO14979 420 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 N4BP3O15049 544 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 CLIC2O15247 247 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 SLC16A3O15427 465 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 RPLP2P05387 115 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 POU3F3P20264 500 aaPredicted RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 CDC25BP30305 580 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 LIG4P49917 911 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 COPB1P53618 953 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 ADGRE1Q14246 886 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 KRT31Q15323 416 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 MAPK6Q16659 721 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 CEP135Q66GS9 1140 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 ARMCX5Q6P1M9 558 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 IRF2BP1Q8IU81 584 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 ZC3H3Q8IXZ2 948 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 ZNF710Q8N1W2 664 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 LINC01465Q8N7H1 131 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 DBF4BQ8NFT6 615 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 EEF2KMTQ96G04 330 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 TUBGCP2Q9BSJ2 902 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 METTL14Q9HCE5 456 aaKnown RBP16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 TAB2Q9NYJ8 693 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 ADGRA3Q8IWK6 1321 aa16.58■□□□□ 0.24
TMEM39A-203ENST00000461654 GBF1Q92538 1859 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 TLL1O43897 1013 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 EXOC3O60645 756 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 GJB5O95377 273 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 CYP2J2P51589 502 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 DEFB103AP81534 67 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 TAP1Q03518 808 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 TMEM132AQ24JP5 1023 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 CDCA2Q69YH5 1023 aaPredicted RBP16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 SLFN12LQ6IEE8 588 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 ZNF410Q86VK4 478 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 SLC9A9Q8IVB4 645 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 C12orf56Q8IXR9 622 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 NLRP7Q8WX94 980 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 SEPT8Q92599 483 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 ZBTB10Q96DT7 871 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 PPP1R9BQ96SB3 815 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 MKNK1Q9BUB5 465 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 NFKBIZQ9BYH8 718 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 FAM49AQ9H0Q0 323 aaPredicted RBP16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 VPS16Q9H269 839 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 CDH23Q9H251 3354 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 MYH11P35749 1972 aa16.57■□□□□ 0.24
TMEM39A-203ENST00000461654 A0A1B0GTH6 734 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 CHRNA1P02708 482 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 VTNP04004 478 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 PTENP60484 403 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 PPP2R3AQ06190 1150 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 FRMD5Q7Z6J6 570 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 RSPH3Q86UC2 560 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 KIAA0319LQ8IZA0 1049 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 NME8Q8N427 588 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 APBB2Q92870 758 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 PDLIM2Q96JY6 352 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 RAD9AQ99638 391 aa16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 INO80BQ9C086 356 aaPredicted RBP16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 PRMT7Q9NVM4 692 aaPredicted RBP16.56■□□□□ 0.24
TMEM39A-203ENST00000461654 DLL1O00548 723 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 PIGRP01833 764 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 AMHP03971 560 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 PRKCBP05771 671 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 KRT13P13646 458 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 GARTP22102 1010 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 MATR3P43243 847 aaKnown RBP eCLIP16.55■□□□□ 0.242e-8■■■□□ 15.9
TMEM39A-203ENST00000461654 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 NLRP11P59045 1033 aaKnown RBP16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 MGAT3Q09327 533 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 ZPBP2Q6X784 338 aa16.55■□□□□ 0.24
TMEM39A-203ENST00000461654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms