RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SCP2P22307 547 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 ABCD1P33897 745 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 MLH1P40692 756 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 AMPD3Q01432 767 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 KRT17Q04695 432 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 UBE3AQ05086 875 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZNF568Q3ZCX4 644 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 RESP18Q5W5W9 173 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 TAS1R3Q7RTX0 852 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 HAUS6Q7Z4H7 955 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZBTB33Q86T24 672 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 CHAMP1Q96JM3 812 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 TCHPQ9BT92 498 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 TNMDQ9H2S6 317 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 NSUN3Q9H649 340 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 SNTG2Q9NY99 539 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 KLK14Q9P0G3 267 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 PUF60Q9UHX1 559 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 GDAQ9Y2T3 454 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 CHD7Q9P2D1 2997 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 PRRC2BQ5JSZ5 2229 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 NT5C1B-RDH14C9J2C7 533 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 RECQL4O94761 1208 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 ALDH2P05091 517 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 HARSP12081 509 aaKnown RBP11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 GAP43P17677 238 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 NMT1P30419 496 aaKnown RBP11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 PBX3P40426 434 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 SCNN1GP51170 649 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 AFF1P51825 1210 aaKnown RBP11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 PLCB3Q01970 1234 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 E2F4Q16254 413 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 MPZL3Q6UWV2 235 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 SFR1Q86XK3 245 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 CCDC65Q8IXS2 484 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 CEP57L1Q8IYX8 460 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 SLC39A11Q8N1S5 342 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 STAMQ92783 540 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 PPP2R3CQ969Q6 453 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 DNAJC19Q96DA6 116 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 TMEM169Q96HH4 297 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZFP42Q96MM3 310 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 TMEM175Q9BSA9 504 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 CCDC94Q9BW85 323 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 CDT1Q9H211 546 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 MAGEF1Q9HAY2 307 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 MIOSQ9NXC5 875 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 SEL1LQ9UBV2 794 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 KCNH3Q9ULD8 1083 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 TBX20Q9UMR3 447 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 LZTS1Q9Y250 596 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 FAN1Q9Y2M0 1017 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZMYM2Q9UBW7 1377 aa11.61□□□□□ -0.55
TRAPPC12-213ENST00000461577 ATG2AQ2TAZ0 1938 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 INPPL1O15357 1258 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 NR1I2O75469 434 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 TOM1L1O75674 476 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 DDHD2O94830 711 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 GALTP07902 379 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 MCF2P10911 925 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 CMA1P23946 247 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 DNAJB1P25685 340 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 SLC11A1P49279 550 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 LIG4P49917 911 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 YARSP54577 528 aaKnown RBP11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 GRIK3Q13003 919 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 BMS1Q14692 1282 aaKnown RBP11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 NOLC1Q14978 699 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 HERC4Q5GLZ8 1057 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 TCEAL5Q5H9L2 206 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 ADALQ6DHV7 355 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZPBP2Q6X784 338 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 MICAL1Q8TDZ2 1067 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZBTB45Q96K62 511 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 MRPL44Q9H9J2 332 aaKnown RBP11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 PTPRHQ9HD43 1115 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 TLR9Q9NR96 1032 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 KBTBD4Q9NVX7 518 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 ANKFY1Q9P2R3 1169 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
TRAPPC12-213ENST00000461577 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 HNRNPDLO14979 420 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 CLDN3O15551 220 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 PROZP22891 400 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 GRM5P41594 1212 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 OR1G1P47890 313 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 OSTNP61366 133 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 ASIC1P78348 528 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 GTF2BQ00403 316 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 PLPP4Q5VZY2 271 aa11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 PDE12Q6L8Q7 609 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-213ENST00000461577 COLGALT2Q8IYK4 626 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms