RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 DDB1Q16531 1140 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 GORABQ5T7V8 394 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 LMBR1LQ6UX01 489 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 KANSL1Q7Z3B3 1105 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 MYH16Q9H6N6 1097 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 IFT22Q9H7X7 185 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 ZMAT4Q9H898 229 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 SPON1Q9HCB6 807 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 KCNG1Q9UIX4 513 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 MSRAQ9UJ68 235 aa4.81□□□□□ -1.64
SPTLC1-203ENST00000461132 MYPNQ86TC9 1320 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 GRXCR1A8MXD5 290 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 TGM5O43548 720 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 SPATA31D3P0C874 917 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 FBLP22087 321 aaKnown RBP4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 NR4A1P22736 598 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 CASRP41180 1078 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 GZMKP49863 264 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 CSRP2Q16527 193 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 GPR158Q5T848 1215 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 OLFML1Q6UWY5 402 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 SPATA31D4Q6ZUB0 917 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 ESPNLQ6ZVH7 1005 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 GDF7Q7Z4P5 450 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 RNF180Q86T96 592 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 ADGRG3Q86Y34 549 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 CERS3Q8IU89 383 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 MYEOVQ96EZ4 313 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 ZNF764Q96H86 408 aaPredicted RBP4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 NDC1Q9BTX1 674 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 EMC7Q9NPA0 242 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 TYW1Q9NV66 732 aaKnown RBP4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 USP36Q9P275 1121 aaKnown RBP4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 USP18Q9UMW8 372 aa4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 NOC2LQ9Y3T9 749 aaKnown RBP4.8□□□□□ -1.64
SPTLC1-203ENST00000461132 GRID2IPA4D2P6 1211 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 ZEB2O60315 1214 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 HLA-DOAP06340 250 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 APOBEC3AP31941 199 aaPredicted RBP4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 PHC1P78364 1004 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 TERF2Q15554 542 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 BROXQ5VW32 411 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 UNQ6494/PRO21346Q6UXR6 183 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 FRMD7Q6ZUT3 714 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 DOK3Q7L591 496 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 HDGFL2Q7Z4V5 671 aaPredicted RBP4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 CCAR1Q8IX12 1150 aaKnown RBP4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 CMTR2Q8IYT2 770 aaKnown RBP4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 ZNF610Q8N9Z0 462 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 BEND2Q8NDZ0 799 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 NELL1Q92832 810 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 SLC5A5Q92911 643 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 CHPF2Q9P2E5 772 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 ANKFY1Q9P2R3 1169 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 HS3ST4Q9Y661 456 aa4.79□□□□□ -1.64
SPTLC1-203ENST00000461132 PCSK5Q92824 1860 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 CENPVL1A0A0U1RR11 272 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 GAGE12BA1L429 117 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 GAGE12HA6NDE8 117 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 DIRC3C9JPN6 131 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 NEMP1O14524 444 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 BRINP1O60477 761 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 ULK1O75385 1050 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 BPIP17213 487 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 MGAT1P26572 445 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 CD69Q07108 199 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 MRPL49Q13405 166 aaKnown RBP4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 PLEKHG6Q3KR16 790 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 STRA8Q7Z7C7 330 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 PLXDC1Q8IUK5 500 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 FAM9AQ8IZU1 332 aaPredicted RBP4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 OR52N2Q8NGI0 321 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 ZNF496Q96IT1 587 aaPredicted RBP4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 CDC5LQ99459 802 aaKnown RBP4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 WDR11Q9BZH6 1224 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 SERHL2Q9H4I8 314 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 ZNF768Q9H5H4 540 aaKnown RBP4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 AKIP1Q9NQ31 210 aa4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 DDX56Q9NY93 547 aaKnown RBP4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 APOBEC2Q9Y235 224 aaKnown RBP4.78□□□□□ -1.64
SPTLC1-203ENST00000461132 A0A0A6YYK5 440 aaPredicted RBP4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 LCHNA4D1U4 455 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 KDM1AO60341 852 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 NCR1O76036 304 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 NDUFA10O95299 355 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 PARNO95453 639 aaKnown RBP4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 LY86O95711 162 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 ZEB1P37275 1124 aaPredicted RBP4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 IL12RB1P42701 662 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 ID4P47928 161 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 ATXN1P54253 815 aaKnown RBP4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 GUCY1B3Q02153 619 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 CCDC178Q5BJE1 867 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 ZKSCAN2Q63HK3 967 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 KRT26Q7Z3Y9 468 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 RD3Q7Z3Z2 195 aa4.77□□□□□ -1.65
SPTLC1-203ENST00000461132 RASSF3Q86WH2 238 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms