RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 HINFPQ9BQA5 517 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 FTHL17Q9BXU8 183 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 POLR3FQ9H1D9 316 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 CUEDC2Q9H467 287 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 POMKQ9H5K3 350 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 LIMD1Q9UGP4 676 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 PCDHB12Q9Y5F1 795 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 R4GN57 208 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 FSCN2O14926 492 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 FGF18O76093 207 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 NPR3P17342 541 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-207ENST00000461113 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-207ENST00000461113 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDAC4-207ENST00000461113 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.2
HDAC4-207ENST00000461113 LAMTOR4Q0VGL1 99 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 PLPP4Q5VZY2 271 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 GPBP1Q86WP2 473 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 RNF149Q8NC42 400 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 DEPTORQ8TB45 409 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
HDAC4-207ENST00000461113 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.2
HDAC4-207ENST00000461113 LRRIQ4A6NIV6 560 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 TBCAO75347 108 aaKnown RBP13.82□□□□□ -0.2
HDAC4-207ENST00000461113 GPR32O75388 356 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-207ENST00000461113 CMA1P23946 247 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 ARL2P36404 184 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 DRP2Q13474 957 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 ST3GAL2Q16842 350 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 RSPO4Q2I0M5 234 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-207ENST00000461113 PDE12Q6L8Q7 609 aaKnown RBP13.82□□□□□ -0.2
HDAC4-207ENST00000461113 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 USP49Q70CQ1 688 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 THNSL1Q8IYQ7 743 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 CEP57L1Q8IYX8 460 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 PDILTQ8N807 584 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 C2orf40Q9H1Z8 148 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 ADAMTS10Q9H324 1103 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 C17orf75Q9HAS0 396 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
HDAC4-207ENST00000461113 A0A087WZ62 844 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 DENND3A2RUS2 1198 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 ERLIN2O94905 339 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 FAM13AO94988 1023 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 DARSP14868 501 aaKnown RBP13.81□□□□□ -0.2
HDAC4-207ENST00000461113 GUCY2CP25092 1073 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 SMTNP53814 917 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 SLC12A3P55017 1021 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 DMP1Q13316 513 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-207ENST00000461113 MCM6Q14566 821 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDAC4-207ENST00000461113 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 AXDND1Q5T1B0 1012 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-207ENST00000461113 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 CES5AQ6NT32 575 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 SHC4Q6S5L8 630 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 KCNK18Q7Z418 384 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 DCLK2Q8N568 766 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 DHX58Q96C10 678 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-207ENST00000461113 NECTIN4Q96NY8 510 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 RTP3Q9BQQ7 232 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 FDXACB1Q9BRP7 624 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-207ENST00000461113 ADAM7Q9H2U9 754 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 ZHX3Q9H4I2 956 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 MAGEF1Q9HAY2 307 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 XPNPEP1Q9NQW7 623 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 LARSQ9P2J5 1176 aaKnown RBP13.81□□□□□ -0.2
HDAC4-207ENST00000461113 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 KCNH3Q9ULD8 1083 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 ST3GAL5Q9UNP4 418 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 PHLPP2Q6ZVD8 1323 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 ACACBO00763 2458 aa13.81□□□□□ -0.2
HDAC4-207ENST00000461113 A0A1W2PQ27 194 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 A0A1W2PQ64 194 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 CCDC169A6NNP5 214 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 HIDE1A8MVS5 230 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 H0YCG3 227 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 INO80B-WBP1J3KQ70 363 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 POLR2DO15514 142 aaKnown RBP13.8□□□□□ -0.2
HDAC4-207ENST00000461113 HIP1RO75146 1068 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 NAMPTP43490 491 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 EFNA5P52803 228 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 C1orf186Q6ZWK4 172 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 ZDHHC14Q8IZN3 488 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 FSIP1Q8NA03 581 aa13.8□□□□□ -0.2
HDAC4-207ENST00000461113 TDRD5Q8NAT2 981 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms