RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ABLIM1O14639 778 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 BAIAP3O94812 1187 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 FGBP02675 491 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 NR3C1P04150 777 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 GARTP22102 1010 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 ADSSP30520 456 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 PMS1P54277 932 aaKnown RBP11.11□□□□□ -0.63
UPF2-204ENST00000460569 EPHB4P54760 987 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 OSTNP61366 133 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 LRRC63Q05C16 580 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 FAM43BQ6ZT52 329 aaPredicted RBP11.11□□□□□ -0.63
UPF2-204ENST00000460569 ZNF365Q70YC5 407 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 C16orf59Q7L2K0 433 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 THNSL1Q8IYQ7 743 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 CEP120Q8N960 986 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 RNF169Q8NCN4 708 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 SAAL1Q96ER3 474 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.11□□□□□ -0.632e-8■■■□□ 16.8
UPF2-204ENST00000460569 APOL6Q9BWW8 343 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 HAPLN2Q9GZV7 340 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 NXF3Q9H4D5 531 aaKnown RBP11.11□□□□□ -0.63
UPF2-204ENST00000460569 RGS18Q9NS28 235 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 C1orf112Q9NSG2 853 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 HSPBP1Q9NZL4 362 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 RWDD2AQ9UIY3 292 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
UPF2-204ENST00000460569 TRAF3IP3Q9Y228 551 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 STYXL1Q9Y6J8 313 aa11.11□□□□□ -0.63
UPF2-204ENST00000460569 ANK1P16157 1881 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 PDCD11Q14690 1871 aaKnown RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 TTC3P53804 2025 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 ABHD14A-ACY1A0A1B0GW23 586 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 GOLGA8IPA6NC78 632 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 GOLGA8JA6NMD2 632 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 C9IYK1 514 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 H0YGN5 161 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 ENPP3O14638 875 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 KIAA0391O15091 583 aaKnown RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 OGTO15294 1046 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 EXOC3O60645 756 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 EFCAB14O75071 495 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 SKIP12755 728 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 NR2F2P24468 414 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 ERCC5P28715 1186 aaPredicted RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 KCNJ6P48051 423 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 WDR5P61964 334 aaKnown RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 EDRF1Q3B7T1 1238 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 SEZ6Q53EL9 994 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 TMEM240Q5SV17 173 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 ANKRD40Q6AI12 368 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 TTI2Q6NXR4 508 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 LRSAM1Q6UWE0 723 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 SLC24A5Q71RS6 500 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 RTN4RL1Q86UN2 441 aaPredicted RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 GPD1LQ8N335 351 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 XXYLT1Q8NBI6 393 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 NAT10Q9H0A0 1025 aaKnown RBP11.1□□□□□ -0.63
UPF2-204ENST00000460569 LRFN2Q9ULH4 789 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 HES2Q9Y543 173 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 IPPQ9Y573 584 aa11.1□□□□□ -0.63
UPF2-204ENST00000460569 TDRD15B5MCY1 1934 aaKnown RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 TRIP11Q15643 1979 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 EXTL3O43909 919 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 RECQL4O94761 1208 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 LDHAP00338 332 aaKnown RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 AMHP03971 560 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 STAG3L1P0CL83 205 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 ITGA4P13612 1032 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 ATF7P17544 494 aaPredicted RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 RPL13P26373 211 aaKnown RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 TNFSF9P41273 254 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 GRM5P41594 1212 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 ACOT2P49753 483 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 DEFB103AP81534 67 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 ADAM9Q13443 819 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 NFIL3Q16649 462 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 CEP135Q66GS9 1140 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.09□□□□□ -0.63
UPF2-204ENST00000460569 SLC9A9Q8IVB4 645 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 TMEM192Q8IY95 271 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 CSGALNACT2Q8N6G5 542 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 SMG8Q8ND04 991 aaKnown RBP11.09□□□□□ -0.63
UPF2-204ENST00000460569 ZSWIM2Q8NEG5 633 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 LPPQ93052 612 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 PGBD4Q96DM1 585 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
UPF2-204ENST00000460569 DUSP9Q99956 384 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms