RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PNKPQ96T60 521 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 RTFDC1Q9BY42 306 aaPredicted RBP15.71■□□□□ 0.11
PTPRU-205ENST00000460170 GOLGA8QA0A0J9YX86 632 aa15.71■□□□□ 0.1
PTPRU-205ENST00000460170 GOLGA8OA6NCC3 632 aa15.71■□□□□ 0.1
PTPRU-205ENST00000460170 GOLGA8NF8WBI6 632 aa15.71■□□□□ 0.1
PTPRU-205ENST00000460170 PHF2O75151 1096 aa15.71■□□□□ 0.1
PTPRU-205ENST00000460170 NBPF9Q3BBW0 867 aa15.71■□□□□ 0.1
PTPRU-205ENST00000460170 SLC30A5Q8TAD4 765 aa15.71■□□□□ 0.1
PTPRU-205ENST00000460170 SDC4P31431 198 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 EARS2Q5JPH6 523 aaKnown RBP15.7■□□□□ 0.1
PTPRU-205ENST00000460170 CYP26B1Q9NR63 512 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 A0A0G2JND7 137 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 M0QYV0 167 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 ZSCAN20P17040 1043 aaPredicted RBP15.7■□□□□ 0.1
PTPRU-205ENST00000460170 FGFR4P22455 802 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 SPOUT1Q5T280 376 aaKnown RBP15.7■□□□□ 0.1
PTPRU-205ENST00000460170 MSH4O15457 936 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 CDK17Q00537 523 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 PDIA2Q13087 525 aaKnown RBP15.7■□□□□ 0.1
PTPRU-205ENST00000460170 COG2Q14746 738 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 FUT8Q9BYC5 575 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 SEMA6BQ9H3T3 888 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 A0A087X0T9 212 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 CHUKO15111 745 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 NR3C2P08235 984 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 FAM228BP0C875 321 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 TMPRSS15P98073 1019 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 TAP1Q03518 808 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 ARL13BQ3SXY8 428 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 BBS5Q8N3I7 341 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 MIPOL1Q8TD10 442 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 ZNF668Q96K58 619 aaPredicted RBP15.7■□□□□ 0.1
PTPRU-205ENST00000460170 PSD3Q9NYI0 1048 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 MID2Q9UJV3 735 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.7■□□□□ 0.1
PTPRU-205ENST00000460170 LRRC14Q15048 493 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 MOXD1Q6UVY6 613 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 ZBED8Q8IZ13 594 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 TEX13BQ9BXU2 312 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 DUSP10Q9Y6W6 482 aa15.7■□□□□ 0.1
PTPRU-205ENST00000460170 EIF3HO15372 352 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 TTLL4Q14679 1199 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 HP1BP3Q5SSJ5 553 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 WDR93Q6P2C0 686 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 HDAC11Q96DB2 347 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 SUCLA2Q9P2R7 463 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 POLLQ9UGP5 575 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 INTUQ9ULD6 942 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 P4HA2O15460 535 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 STAT5BP51692 787 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 TGS1Q96RS0 853 aaKnown RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 LACRTQ9GZZ8 138 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 EPN3Q9H201 632 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 ALG6Q9Y672 507 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 ATP5HO75947 161 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 PLA2G4AP47712 749 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 KPNA2P52292 529 aaKnown RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 THOC5Q13769 683 aaKnown RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 RSBN1LQ6PCB5 846 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 SYDE1Q6ZW31 735 aaPredicted RBP15.69■□□□□ 0.1
PTPRU-205ENST00000460170 CRLF3Q8IUI8 442 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 TTC39CQ8N584 583 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 GOLPH3Q9H4A6 298 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 NAGPAQ9UK23 515 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 ARHGEF37A1IGU5 675 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 MED24O75448 989 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 AGTP01019 485 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 CIITAP33076 1130 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 ACOT2P49753 483 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 SRLQ86TD4 932 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 ATP11CQ8NB49 1132 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 ZIM3Q96PE6 472 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 RIOX1Q9H6W3 641 aa15.69■□□□□ 0.1
PTPRU-205ENST00000460170 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 FOXP2O15409 715 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 TAF11Q15544 211 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 PAPD7Q5XG87 772 aaKnown RBP15.68■□□□□ 0.1
PTPRU-205ENST00000460170 DSTYKQ6XUX3 929 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 RNF149Q8NC42 400 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 MCUQ8NE86 351 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 ISCUQ9H1K1 167 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 KCNH7Q9NS40 1196 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 SSTR3P32745 418 aaPredicted RBP15.68■□□□□ 0.1
PTPRU-205ENST00000460170 ARSEP51690 589 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 BCAR1P56945 870 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 NFIAQ12857 509 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 STAT4Q14765 748 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 FAM102AQ5T9C2 384 aaPredicted RBP15.68■□□□□ 0.1
PTPRU-205ENST00000460170 SPOPLQ6IQ16 392 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 AGPAT3Q9NRZ7 376 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 CAPN6Q9Y6Q1 641 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 SNRPFP62306 86 aaKnown RBP15.68■□□□□ 0.1
PTPRU-205ENST00000460170 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 WDR75Q8IWA0 830 aaKnown RBP15.68■□□□□ 0.1
PTPRU-205ENST00000460170 CPA5Q8WXQ8 436 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 SPATA33Q96N06 139 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 CCT8L2Q96SF2 557 aa15.68■□□□□ 0.1
PTPRU-205ENST00000460170 TRAIPQ9BWF2 469 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms