RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MTMR10Q9NXD2 777 aa11.27□□□□□ -0.61
USP39-210ENST00000459775 TAB2Q9NYJ8 693 aa11.27□□□□□ -0.61
USP39-210ENST00000459775 IFNKQ9P0W0 207 aa11.27□□□□□ -0.61
USP39-210ENST00000459775 TRIP12Q14669 1992 aaPredicted RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 B4GALT4O60513 344 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 AKAP3O75969 853 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 FLT3P36888 993 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 FANCCQ00597 558 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 MBTD1Q05BQ5 628 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 PPP2R5AQ15172 486 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 SND1Q7KZF4 910 aaKnown RBP eCLIP11.26□□□□□ -0.614e-6■■□□□ 12.7
USP39-210ENST00000459775 APTXQ7Z2E3 356 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 DHX38Q92620 1227 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 JPH2Q9BR39 696 aaPredicted RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 CCDC113Q9H0I3 377 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 VPS16Q9H269 839 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 ST6GALNAC4Q9H4F1 302 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 TYW1Q9NV66 732 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 INTS13Q9NVM9 706 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 ANKFY1Q9P2R3 1169 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 OGDHLQ9ULD0 1010 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 MYH11P35749 1972 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 SCN10AQ9Y5Y9 1956 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 SMIM35A0A1B0GVV1 85 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 KBTBD13C9JR72 458 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 PDXKO00764 312 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 TEX33O43247 280 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 GAS2O43903 313 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 ADCY5O95622 1261 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 KRT31Q15323 416 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 TCP11X2Q5H9J9 407 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 EEF1DP3Q658K8 133 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 CDCA2Q69YH5 1023 aaPredicted RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 C7orf61Q8IZ16 206 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 PAWRQ96IZ0 340 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 SCYL1Q96KG9 808 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 TSG101Q99816 390 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 TRIM5Q9C035 493 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 XPO4Q9C0E2 1151 aaKnown RBP11.26□□□□□ -0.61
USP39-210ENST00000459775 TSPYL1Q9H0U9 437 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP39-210ENST00000459775 PHF24Q9UPV7 400 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 TRAF3IP3Q9Y228 551 aa11.26□□□□□ -0.61
USP39-210ENST00000459775 LOXHD1Q8IVV2 1947 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 DNM1LO00429 736 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 SERPINC1P01008 464 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 PRKCBP05771 671 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 THPOP40225 353 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 FKBP3Q00688 224 aaKnown RBP11.25□□□□□ -0.61
USP39-210ENST00000459775 LRRC63Q05C16 580 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 STXBP4Q6ZWJ1 553 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 SERINC5Q86VE9 423 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 ACRBPQ8NEB7 543 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 RSPH9Q9H1X1 276 aaPredicted RBP11.25□□□□□ -0.61
USP39-210ENST00000459775 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
USP39-210ENST00000459775 CHRNA1P02708 482 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 GNAT1P11488 350 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 NAT1P18440 290 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 LIG4P49917 911 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 STRN3Q13033 797 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 TFDP1Q14186 410 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 AMHR2Q16671 573 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 CT47A1Q5JQC4 288 aaPredicted RBP11.24□□□□□ -0.61
USP39-210ENST00000459775 ARMCX5Q6P1M9 558 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 CBWD2Q8IUF1 395 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP39-210ENST00000459775 TSEN34Q9BSV6 310 aaKnown RBP11.24□□□□□ -0.61
USP39-210ENST00000459775 FZD8Q9H461 694 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 ALPK3Q96L96 1907 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 CALUO43852 315 aaPredicted RBP11.24□□□□□ -0.61
USP39-210ENST00000459775 PQBP1O60828 265 aaKnown RBP11.24□□□□□ -0.61
USP39-210ENST00000459775 PHKA2P46019 1235 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 ACOT2P49753 483 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 WNT7BP56706 349 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 OSTNP61366 133 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 MAPK6Q16659 721 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 HS2ST1Q7LGA3 356 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 ZBTB8OSQ8IWT0 167 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 C1orf131Q8NDD1 294 aaKnown RBP11.24□□□□□ -0.61
USP39-210ENST00000459775 PIK3R5Q8WYR1 880 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 POMGNT1Q8WZA1 660 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 COL25A1Q9BXS0 654 aaPredicted RBP11.24□□□□□ -0.61
USP39-210ENST00000459775 THAP9Q9H5L6 903 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 TMEM206Q9H813 350 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 DMAC2Q9NW81 257 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 HSPBP1Q9NZL4 362 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 NOD1Q9Y239 953 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 CDY2AQ9Y6F7 541 aa11.24□□□□□ -0.61
USP39-210ENST00000459775 KLHL33A6NCF5 533 aa11.23□□□□□ -0.61
USP39-210ENST00000459775 ARVCFO00192 962 aa11.23□□□□□ -0.61
USP39-210ENST00000459775 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms