RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 WNT3AP56704 352 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 KRTAP12-2P59991 146 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 HERVK_113P62684 666 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 IRF9Q00978 393 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 TFF2Q03403 129 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 PSMD2Q13200 908 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 SF1Q15637 639 aaKnown RBP0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 DGKDQ16760 1214 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 KRTAP24-1Q3LI83 254 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 LCE1FQ5T754 118 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 PDXDC1Q6P996 788 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 ZNF549Q6P9A3 640 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 FOXR2Q6PJQ5 311 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 DOK3Q7L591 496 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 CLEC14AQ86T13 490 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 RASAL3Q86YV0 1011 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 COLGALT2Q8IYK4 626 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 FAM43AQ8N2R8 423 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 SYNPOQ8N3V7 929 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 OR10H5Q8NGA6 315 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 CTCFLQ8NI51 663 aaPredicted RBP0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 TAF15Q92804 592 aaKnown RBP eCLIP0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 ANKRD9Q96BM1 317 aaPredicted RBP0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 IL17RAQ96F46 866 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 WDR92Q96MX6 357 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 CRBNQ96SW2 442 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 CPEB1Q9BZB8 566 aaKnown RBP0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 GALNT9Q9HCQ5 603 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 KBTBD4Q9NVX7 518 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 UBP1Q9NZI7 540 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 ADAMTS1Q9UHI8 967 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 PRO0461Q9UI25 63 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 MAGEL2Q9UJ55 1249 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 SERPINA10Q9UK55 444 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 ZNRF3Q9ULT6 936 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 SYNPO2Q9UMS6 1093 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 PCDHB10Q9UN67 800 aa0.59□□□□□ -2.31
SNORD42B-201ENST00000458893 CYP2D7A0A087X1C5 515 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 SMIM35A0A1B0GVV1 85 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 PRAMEF22A3QJZ6 481 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 FAM90A27PA6NNH2 459 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 FAM47E-STBD1D6RA91 191 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 YY2O15391 372 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 MTSS1O43312 755 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 TBX6O95947 436 aaPredicted RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 ITGAEP38570 1179 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 XPCQ01831 940 aaPredicted RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 SCAPQ12770 1279 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 UBXN2BQ14CS0 331 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 RBMS2Q15434 407 aaKnown RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 TESK1Q15569 626 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 NBPF8Q3BBV2 869 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 ZNF772Q68DY9 489 aaPredicted RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 ZNF324BQ6AW86 544 aaPredicted RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 KIAA1211LQ6NV74 962 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 DRICH1Q6PGQ1 229 aaPredicted RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 ZNF66Q6ZN08 573 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 PEG10Q86TG7 708 aaKnown RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 XYLT1Q86Y38 959 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 MAPKAPK5Q8IW41 473 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 SPAG16Q8N0X2 631 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 TMEM132CQ8N3T6 1108 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 C16orf52Q8NHV5 167 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 PPP1R14CQ8TAE6 165 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 BTN2A2Q8WVV5 523 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 CUL5Q93034 780 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 FBXL20Q96IG2 436 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 PHACTR3Q96KR7 559 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 SLITRK1Q96PX8 696 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 UIMC1Q96RL1 719 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 DUSP9Q99956 384 aaKnown RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 AMNQ9BXJ7 453 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 TRIM55Q9BYV6 548 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 EGLN1Q9GZT9 426 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 GPR27Q9NS67 375 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 PPARGC1AQ9UBK2 798 aaKnown RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 APEX2Q9UBZ4 518 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 ST3GAL5Q9UNP4 418 aa0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 MTO1Q9Y2Z2 717 aaKnown RBP0.58□□□□□ -2.32
SNORD42B-201ENST00000458893 CACNA1IQ9P0X4 2223 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 A0A087WYN8 130 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 CARNS1A5YM72 827 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 SOWAHDA6NJG2 315 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 MARCH11A6NNE9 402 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 B4DGG1 531 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 TARM1B6A8C7 271 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 ARNTLO00327 626 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 MPPED1O15442 326 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 MAFGO15525 162 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 LDB3O75112 727 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 MAFO75444 373 aaPredicted RBP0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 ERN1O75460 977 aaKnown RBP0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 BAG4O95429 457 aaKnown RBP0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 TTLL1O95922 423 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 SCG5P05408 212 aa0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 P4HBP07237 508 aaKnown RBP0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 HNRNPCP07910 306 aaKnown RBP eCLIP0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 FGF3P11487 239 aaPredicted RBP0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 GSPT1P15170 499 aaKnown RBP0.57□□□□□ -2.32
SNORD42B-201ENST00000458893 KCNJ4P48050 445 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms