RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 OR2W6PQ8NHA6 318 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.82■□□□□ 0.92
SNX27-204ENST00000458013 ZNF711Q9Y462 761 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 CALB1P05937 261 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 PYGBP11216 843 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 KLK7P49862 253 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 SH2D3CQ8N5H7 860 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 FEM1BQ9UK73 627 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 SCG3Q8WXD2 468 aaKnown RBP20.82■□□□□ 0.92
SNX27-204ENST00000458013 DIS3Q9Y2L1 958 aaKnown RBP20.82■□□□□ 0.92
SNX27-204ENST00000458013 SAMD9Q5K651 1589 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 PALLDQ8WX93 1383 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 ALCAMQ13740 583 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 PCSK7Q16549 785 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 RBAKQ9NYW8 714 aaPredicted RBP20.82■□□□□ 0.92
SNX27-204ENST00000458013 MINPP1Q9UNW1 487 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 IGSF1Q8N6C5 1336 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 GRAP2O75791 330 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 FAM180AQ6UWF9 173 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 FASTKD5Q7L8L6 764 aaKnown RBP20.81■□□□□ 0.92
SNX27-204ENST00000458013 LRRC1Q9BTT6 524 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 APOL1O14791 398 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 DGKIO75912 1065 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 URGCPQ8TCY9 931 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 CELF1Q92879 486 aaKnown RBP20.81■□□□□ 0.92
SNX27-204ENST00000458013 PIDD1Q9HB75 910 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 ARHGEF25Q86VW2 580 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 RNF146Q9NTX7 359 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 RGL1Q9NZL6 768 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 MAFGO15525 162 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 SF3B3Q15393 1217 aaKnown RBP20.81■□□□□ 0.92
SNX27-204ENST00000458013 COA1Q9GZY4 146 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 HSPBP1Q9NZL4 362 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 LIFRP42702 1097 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 TNFAIP2Q03169 654 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 SPDYAQ5MJ70 313 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 ADGRA2Q96PE1 1338 aa20.81■□□□□ 0.92
SNX27-204ENST00000458013 ATMINO43313 823 aaPredicted RBP20.8■□□□□ 0.92
SNX27-204ENST00000458013 PYGLP06737 847 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 MAGEA9P43362 315 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 FMR1NBQ8N0W7 255 aaPredicted RBP20.8■□□□□ 0.92
SNX27-204ENST00000458013 SEL1LQ9UBV2 794 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 ELMO2Q96JJ3 720 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 IRX2Q9BZI1 471 aaPredicted RBP20.8■□□□□ 0.92
SNX27-204ENST00000458013 CYP26B1Q9NR63 512 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 ERBB3P21860 1342 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 IL1RL2Q9HB29 575 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 CPDO75976 1380 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 MYO1GB0I1T2 1018 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 ZBTB7AO95365 584 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 TYK2P29597 1187 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 PID1Q7Z2X4 250 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 CCDC188H7C350 402 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 EIF3EP60228 445 aaKnown RBP20.8■□□□□ 0.92
SNX27-204ENST00000458013 NAALADL2Q58DX5 795 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 EFHC2Q5JST6 749 aa20.8■□□□□ 0.92
SNX27-204ENST00000458013 FAM205CA6NFA0 338 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 CHGBP05060 677 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 CHRNA3P32297 505 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 SHC4Q6S5L8 630 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 ABHD8Q96I13 439 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 KIFC3Q9BVG8 833 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 AIPL1Q9NZN9 384 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 POLRMTO00411 1230 aaKnown RBP20.79■□□□□ 0.92
SNX27-204ENST00000458013 TTLL6Q8N841 843 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 MASTLQ96GX5 879 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 WDR24Q96S15 920 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 ZC4H2Q9NQZ6 224 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 SYNMO15061 1565 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 LONP2Q86WA8 852 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 NDE1Q9NXR1 346 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 TRAF3IP3Q9Y228 551 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 MXD3Q9BW11 206 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 TAF1DQ9H5J8 278 aaPredicted RBP20.79■□□□□ 0.92
SNX27-204ENST00000458013 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 ACOT2P49753 483 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 AP3B2Q13367 1082 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 P3H1Q32P28 736 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 GPD1LQ8N335 351 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 SLC25A41Q8N5S1 370 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 TMEM143Q96AN5 459 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 ACSF2Q96CM8 615 aaPredicted RBP20.79■□□□□ 0.92
SNX27-204ENST00000458013 MAN1A2O60476 641 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 ABCD1P33897 745 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 BCAR1P56945 870 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 CLEC10AQ8IUN9 316 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 TFR2Q9UP52 801 aa20.79■□□□□ 0.92
SNX27-204ENST00000458013 PPP3CCP48454 512 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 RAP1GDS1P52306 607 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 SPP2Q13103 211 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 DMC1Q14565 340 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 RPS6P62753 249 aaKnown RBP20.78■□□□□ 0.92
SNX27-204ENST00000458013 BTNL9Q6UXG8 535 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 EPAS1Q99814 870 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 ZFYVE16Q7Z3T8 1539 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 TRMT2AQ8IZ69 625 aaKnown RBP20.78■□□□□ 0.92
SNX27-204ENST00000458013 RUBCNLQ9H714 662 aa20.78■□□□□ 0.92
SNX27-204ENST00000458013 CHCHD3Q9NX63 227 aaKnown RBP20.78■□□□□ 0.92
SNX27-204ENST00000458013 LIMA1Q9UHB6 759 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms