RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 GMCL1P1Q8NEA9 526 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 TFAMQ00059 246 aaKnown RBP17.46■□□□□ 0.39
LSS-205ENST00000457828 EVI5O60447 810 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 P4HA1P13674 534 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 ERVK-9P63128 1117 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 PLEKHH3Q7Z736 793 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 SLC35G2Q8TBE7 412 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 RFFLQ8WZ73 363 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 TMEM106CQ9BVX2 250 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 SPATC1LQ9H0A9 340 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 ASTN2O75129 1339 aaPredicted RBP17.46■□□□□ 0.39
LSS-205ENST00000457828 LPXNO60711 386 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 MYBP10242 640 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
LSS-205ENST00000457828 SLMAPQ14BN4 828 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 EPHA7Q15375 998 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 LRIG3Q6UXM1 1119 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 SEPT1Q8WYJ6 367 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 CLMNQ96JQ2 1002 aa17.46■□□□□ 0.39
LSS-205ENST00000457828 XPO6Q96QU8 1125 aaKnown RBP17.46■□□□□ 0.39
LSS-205ENST00000457828 PRMT1Q99873 361 aaKnown RBP17.46■□□□□ 0.39
LSS-205ENST00000457828 ASCC2Q9H1I8 757 aaPredicted RBP17.46■□□□□ 0.39
LSS-205ENST00000457828 TYW1Q9NV66 732 aaKnown RBP17.46■□□□□ 0.39
LSS-205ENST00000457828 NMT1P30419 496 aaKnown RBP17.45■□□□□ 0.38
LSS-205ENST00000457828 ITIH3Q06033 890 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 KAZNQ674X7 775 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 RHPN2Q8IUC4 686 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 LMNTD2Q8IXW0 634 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 TMBIM4Q9HC24 238 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
LSS-205ENST00000457828 PDE6CP51160 858 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 MEI1Q5TIA1 1274 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 KCNK18Q7Z418 384 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 RAPGEF5Q92565 580 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 TMEM206Q9H813 350 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 C1orf112Q9NSG2 853 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 GOLGA8IPA6NC78 632 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 GOLGA8JA6NMD2 632 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 ATF7P17544 494 aaPredicted RBP17.45■□□□□ 0.38
LSS-205ENST00000457828 PPP1R14CQ8TAE6 165 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 BLOC1S4Q9NUP1 217 aa17.45■□□□□ 0.38
LSS-205ENST00000457828 FTLP02792 175 aaPredicted RBP17.44■□□□□ 0.38
LSS-205ENST00000457828 GCLMP48507 274 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 CYB5D1Q6P9G0 228 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.44■□□□□ 0.389e-7■■□□□ 12.5
LSS-205ENST00000457828 DBR1Q9UK59 544 aaKnown RBP17.44■□□□□ 0.38
LSS-205ENST00000457828 TMED2Q15363 201 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 MAPK6Q16659 721 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 C6orf163Q5TEZ5 329 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 CCDC137Q6PK04 289 aaKnown RBP17.44■□□□□ 0.38
LSS-205ENST00000457828 PNMA5Q96PV4 448 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 DSG3P32926 999 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 FYB2Q5VWT5 728 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 ZNF571Q7Z3V5 609 aaPredicted RBP17.44■□□□□ 0.38
LSS-205ENST00000457828 FRMD5Q7Z6J6 570 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 TPCN2Q8NHX9 752 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 MROH8Q9H579 483 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 KCNH7Q9NS40 1196 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 COL16A1Q07092 1604 aaPredicted RBP17.44■□□□□ 0.38
LSS-205ENST00000457828 SLC16A4O15374 487 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 BYSLQ13895 437 aaKnown RBP17.44■□□□□ 0.38
LSS-205ENST00000457828 NPY5RQ15761 445 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 RHOT2Q8IXI1 618 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.44■□□□□ 0.382e-6■■■■■ 55.6
LSS-205ENST00000457828 STMN2Q93045 179 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 MCUR1Q96AQ8 359 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 MXRA8Q9BRK3 442 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
LSS-205ENST00000457828 GH1P01241 217 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 HSPA6P17066 643 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 ELF1P32519 619 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 DEFB115Q30KQ5 88 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 ZNF449Q6P9G9 518 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 SRRM1Q8IYB3 904 aaKnown RBP17.43■□□□□ 0.38
LSS-205ENST00000457828 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 HOXA7P31268 230 aaPredicted RBP17.43■□□□□ 0.38
LSS-205ENST00000457828 SOX5P35711 763 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 SKOR1P84550 965 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 SGSM3Q96HU1 749 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.43■□□□□ 0.38
LSS-205ENST00000457828 SYNGAP1Q96PV0 1343 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 MAPK4P31152 587 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 SLC29A2Q14542 456 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 TWF2Q6IBS0 349 aaKnown RBP17.43■□□□□ 0.38
LSS-205ENST00000457828 C4orf32Q8N8J7 132 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 KCNV2Q8TDN2 545 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 SYN2Q92777 582 aaPredicted RBP17.43■□□□□ 0.38
LSS-205ENST00000457828 OSGEPQ9NPF4 335 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 SALL4Q9UJQ4 1053 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 ANAPC5Q9UJX4 755 aa17.43■□□□□ 0.38
LSS-205ENST00000457828 KLRG2A4D1S0 409 aaPredicted RBP17.42■□□□□ 0.38
LSS-205ENST00000457828 PODXLO00592 558 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 RGS2P41220 211 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 MXI1P50539 228 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 KIRREL3Q8IZU9 778 aa17.42■□□□□ 0.38
LSS-205ENST00000457828 SHISA4Q96DD7 197 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms