RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 DCAF4L1Q3SXM0 396 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 APBB1IPQ7Z5R6 666 aaPredicted RBP17.86■□□□□ 0.45
CPSF6-203ENST00000456847 FAM178BQ8IXR5 827 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 DAW1Q8N136 415 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 SYT2Q8N9I0 419 aaPredicted RBP17.86■□□□□ 0.45
CPSF6-203ENST00000456847 SNX21Q969T3 373 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 MIOSQ9NXC5 875 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 CLEC1BQ9P126 229 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 ZMYM2Q9UBW7 1377 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 C2orf71A6NGG8 1288 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 GUCY2CP25092 1073 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 GRIN1Q05586 938 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 ATF7IP2Q5U623 682 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 EEF1DP3Q658K8 133 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 FAM173BQ6P4H8 233 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 COLGALT2Q8IYK4 626 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 AUTS2Q8WXX7 1259 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 MSLNLQ96KJ4 702 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 SNTG2Q9NY99 539 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 MTMR6Q9Y217 621 aa17.86■□□□□ 0.45
CPSF6-203ENST00000456847 SFI1A8K8P3 1242 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 STX6O43752 255 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 CTSAP10619 480 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 SLC12A3P55017 1021 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 CEBPZQ03701 1054 aaKnown RBP17.85■□□□□ 0.45
CPSF6-203ENST00000456847 GRIK3Q13003 919 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 MAPK7Q13164 816 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 DHX8Q14562 1220 aaKnown RBP17.85■□□□□ 0.45
CPSF6-203ENST00000456847 MRPL43Q8N983 215 aaKnown RBP17.85■□□□□ 0.45
CPSF6-203ENST00000456847 VN1R2Q8NFZ6 395 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 C17orf75Q9HAS0 396 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 STK39Q9UEW8 545 aa17.85■□□□□ 0.45
CPSF6-203ENST00000456847 RECQL4O94761 1208 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 MARCKSP29966 332 aaPredicted RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 COASYQ13057 564 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 GIT2Q14161 759 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 KARSQ15046 597 aaKnown RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 NT5DC1Q5TFE4 455 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 TMEM134Q9H6X4 195 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 KCND2Q9NZV8 630 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 GDAQ9Y2T3 454 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 RBM19Q9Y4C8 960 aaKnown RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 SPTBN5Q9NRC6 3674 aaKnown RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 TTC28Q96AY4 2481 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 XIRP2A4UGR9 3374 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 SLC16A4O15374 487 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 PLCG1P19174 1290 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 DSC1Q08554 894 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 SMAD2Q15796 467 aaKnown RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 GPBP1Q86WP2 473 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 GJD3Q8N144 294 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 SMRP1Q8NCR6 262 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 CASP10Q92851 521 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 MRPL4Q9BYD3 311 aaKnown RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
CPSF6-203ENST00000456847 MARCH5Q9NX47 278 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 ARHGAP28Q9P2N2 729 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 PRKAG3Q9UGI9 489 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 VCANP13611 3396 aa17.84■□□□□ 0.45
CPSF6-203ENST00000456847 NPHP3-ACAD11A0A0J9YXS1 232 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 KRT18P05783 430 aaKnown RBP17.83■□□□□ 0.44
CPSF6-203ENST00000456847 PLS3P13797 630 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 SMTNP53814 917 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 STRN3Q13033 797 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 ZNF568Q3ZCX4 644 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 COLEC11Q9BWP8 271 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 VN1R3Q9BXE9 311 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 KCNG1Q9UIX4 513 aa17.83■□□□□ 0.44
CPSF6-203ENST00000456847 CLASP2O75122 1294 aaKnown RBP17.82■□□□□ 0.44
CPSF6-203ENST00000456847 URODP06132 367 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 PTPAQ15257 358 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 ANKRD54Q6NXT1 300 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 POP1Q99575 1024 aaKnown RBP17.82■□□□□ 0.44
CPSF6-203ENST00000456847 HERC2P3Q9BVR0 1158 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 APOL5Q9BWW9 433 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 TNFSF13BQ9Y275 285 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 USP15Q9Y4E8 981 aaPredicted RBP17.82■□□□□ 0.44
CPSF6-203ENST00000456847 HCFC2Q9Y5Z7 792 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 TXLNAP40222 546 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 ZP2Q05996 745 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 MCM6Q14566 821 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 SPECC1Q5M775 1068 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 ADHFE1Q8IWW8 467 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 GSTCDQ8NEC7 633 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 RAD54LQ92698 747 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 ACO2Q99798 780 aaKnown RBP17.82■□□□□ 0.44
CPSF6-203ENST00000456847 EMILIN2Q9BXX0 1053 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 CD320Q9NPF0 282 aa17.82■□□□□ 0.44
CPSF6-203ENST00000456847 MRPL17Q9NRX2 175 aaKnown RBP17.82■□□□□ 0.44
CPSF6-203ENST00000456847 LARSQ9P2J5 1176 aaKnown RBP17.82■□□□□ 0.44
CPSF6-203ENST00000456847 FBXO2Q9UK22 296 aaPredicted RBP17.82■□□□□ 0.44
CPSF6-203ENST00000456847 C2CD2LO14523 706 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 FAM13AO94988 1023 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 SOD2P04179 222 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 HARSP12081 509 aaKnown RBP17.81■□□□□ 0.44
CPSF6-203ENST00000456847 TMEM184AQ6ZMB5 413 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 TAS1R3Q7RTX0 852 aa17.81■□□□□ 0.44
CPSF6-203ENST00000456847 ZBTB33Q86T24 672 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms