RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TMEM8AQ9HCN3 771 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 CTTNBP2NLQ9P2B4 639 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 PLAAQ9Y263 795 aa19.81■□□□□ 0.76
SEMA3B-209ENST00000456560 COL11A1P12107 1806 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 CYP26A1O43174 497 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 DAPK3O43293 454 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 PTPRAP18433 802 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 HSD17B3P37058 310 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 USP8P40818 1118 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 PTENP60484 403 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 UAP1Q16222 522 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 SNRNP48Q6IEG0 339 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 LRRC45Q96CN5 670 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 NAP1L3Q99457 506 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 CELF4Q9BZC1 486 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 FAM107BQ9H098 131 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 CNOT7Q9UIV1 285 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 GRIN2DO15399 1336 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 MIF4GDA9UHW6 222 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 YBX3P16989 372 aaKnown RBP eCLIP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 SOX10P56693 466 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 CLUL1Q15846 466 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 PPP2R5EQ16537 467 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 PLCD3Q8N3E9 789 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 PPM1KQ8N3J5 372 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 NSUN6Q8TEA1 469 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 ZKSCAN4Q969J2 545 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 CCDC127Q96BQ5 260 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 CEP170P1Q96L14 293 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 RPS6KC1Q96S38 1066 aa19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 ZNF214Q9UL59 606 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-209ENST00000456560 ARID2Q68CP9 1835 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 PHIPQ8WWQ0 1821 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 H0YGN5 161 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 GTF2H1P32780 548 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 CCT5P48643 541 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 FMO1Q01740 532 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 PRPF4BQ13523 1007 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 SLC47A2Q86VL8 602 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 SH2D3CQ8N5H7 860 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 ATP6V0A1Q93050 837 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 POP1Q99575 1024 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 FAM114A2Q9NRY5 505 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 TELO2Q9Y4R8 837 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 NFS1Q9Y697 457 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 NFASCO94856 1347 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 KIAA1217Q5T5P2 1943 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 A6NNZ2 444 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 DKC1O60832 514 aaKnown RBP eCLIP19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 RTP1P59025 263 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 ENPEPQ07075 957 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 ZNF211Q13398 564 aaPredicted RBP19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 TUBB8Q3ZCM7 444 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 KCTD16Q68DU8 428 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 KDM7AQ6ZMT4 941 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 XPNPEP1Q9NQW7 623 aa19.79■□□□□ 0.76
SEMA3B-209ENST00000456560 ADGRA3Q8IWK6 1321 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 A0A087WUV0 522 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 EIF3HO15372 352 aaKnown RBP eCLIP19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 PSAPP07602 524 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 FLT3P36888 993 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 GNGT1P63211 74 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 CYP24A1Q07973 514 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 NAA35Q5VZE5 725 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 ICE2Q659A1 982 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 SWSAP1Q6NVH7 229 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 TADA2BQ86TJ2 420 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 TAS1R2Q8TE23 839 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 ATP6V1G3Q96LB4 118 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 TMBIM4Q9HC24 238 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 ERVK-5Q9HDB9 667 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 ACP6Q9NPH0 428 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 TOPORSQ9NS56 1045 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 ATP2A1O14983 1001 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 DGAT1O75907 488 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 MMEP08473 750 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 PEX5P50542 639 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 TMEM132BQ14DG7 1078 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 FBXL13Q8NEE6 735 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 MORC4Q8TE76 937 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 KRT35Q92764 455 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 ZSWIM1Q9BR11 485 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 TMOD4Q9NZQ9 345 aa19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 UTP11Q9Y3A2 253 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-209ENST00000456560 EBAG9O00559 213 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 CYP1A2P05177 515 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 CYP11B1P15538 503 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 HMGCS2P54868 508 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 ABHD15Q6UXT9 468 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 UBL4BQ8N7F7 174 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 MCPH1Q8NEM0 835 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 ATP8B4Q8TF62 1192 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 NT5C1BQ96P26 610 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 PICK1Q9NRD5 415 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 RAB20Q9NX57 234 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 GJA3Q9Y6H8 435 aa19.77■□□□□ 0.76
SEMA3B-209ENST00000456560 HMGB1P1B2RPK0 211 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 C19orf81C9J6K1 198 aa19.76■□□□□ 0.75
SEMA3B-209ENST00000456560 GARTP22102 1010 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms