RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 GAS2O43903 313 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MAPK1P28482 360 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 FOXR2Q6PJQ5 311 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 CEP70Q8NHQ1 597 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 DNAJC9Q8WXX5 260 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 RFFLQ8WZ73 363 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 GSAPA4D1B5 854 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 LPXNO60711 386 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MAPK9P45984 424 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 SKP1P63208 163 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 DGKHQ86XP1 1220 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 KIAA2013Q8IYS2 634 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MAGEB6Q8N7X4 407 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 MKNK1Q9BUB5 465 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 LSM14BQ9BX40 385 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ASNSD1Q9NWL6 643 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 IRAK4Q9NWZ3 460 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 IVNS1ABPQ9Y6Y0 642 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 ERVK-7P63135 1459 aa5.51□□□□□ -1.53
CSMD3-204ENST00000455883 BAZ2AQ9UIF9 1905 aaKnown RBP5.51□□□□□ -1.53
CSMD3-204ENST00000455883 HIF1AQ16665 826 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PLEKHM3Q6ZWE6 761 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 UNC13DQ70J99 1090 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 USP33Q8TEY7 942 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 DACH2Q96NX9 599 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TRERF1Q96PN7 1200 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MCCC1Q96RQ3 725 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PCDHGB4Q9UN71 923 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 FAM32AQ9Y421 112 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PSMD14O00487 310 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ITIH2P19823 946 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 KIAA1755Q5JYT7 1200 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ARMC3Q5W041 872 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RBM17Q96I25 401 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 LARP6Q9BRS8 491 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 FAM207AQ9NSI2 230 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 C20orf96Q9NUD7 363 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MYO3BQ8WXR4 1341 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 EVPLLA8MZ36 301 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MED26O95402 600 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 NUDT18Q6ZVK8 323 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RSRC2Q7L4I2 434 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 USHBP1Q8N6Y0 703 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MINDY2Q8NBR6 621 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 GRPEL2Q8TAA5 225 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MAGEC3Q8TD91 643 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 CNOT6LQ96LI5 555 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ZBED2Q9BTP6 218 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 EPB41L5Q9HCM4 733 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 HDAC6Q9UBN7 1215 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ACTL7BQ9Y614 415 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SENP3-EIF4A1A0A087X0R7 540 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 IRGMA1A4Y4 181 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 EFTUD2Q15029 972 aaKnown RBP eCLIP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 FAM133BQ5BKY9 247 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 FRMD5Q7Z6J6 570 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PIK3C3Q8NEB9 887 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SEPT1Q8WYJ6 367 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RANBP17Q9H2T7 1088 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 NEK6Q9HC98 313 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SELENONQ9NZV5 590 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RABL2AQ9UBK7 228 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RABL2BQ9UNT1 228 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 LIG4P49917 911 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TMPRSS15P98073 1019 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TTC27Q6P3X3 843 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TRPM8Q7Z2W7 1104 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MAF1Q9H063 256 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM39Q9HCM9 518 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 NRBP2Q9NSY0 501 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PARVAQ9NVD7 372 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RGL1Q9NZL6 768 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 CALB2P22676 271 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 EHHADHQ08426 723 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SHCBP1Q8NEM2 672 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 FAM227BQ96M60 508 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM31Q9BZY9 425 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 GINM1Q9NU53 330 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PSMC3IPQ9P2W1 217 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 KIF13BQ9NQT8 1826 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 H3BRJ5 948 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 IL12AP29459 219 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RFX4Q33E94 735 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SPANXN2Q5MJ10 180 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 BICRALQ6AI39 1079 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 NXNQ6DKJ4 435 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 RASGRP2Q7LDG7 609 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM59Q8IWR1 403 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 AFAP1Q8N556 730 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SLC30A5Q8TAD4 765 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ACCSQ96QU6 501 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TEKT3Q9BXF9 490 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 CHPF2Q9P2E5 772 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SGK1O00141 431 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SVOPQ8N4V2 548 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 IP6K1Q92551 441 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms