RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 GRM5P41594 1212 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 DEFB103AP81534 67 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 KCNA1Q09470 495 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 EEF1DP3Q658K8 133 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 SLC39A4Q6P5W5 647 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 FOXR2Q6PJQ5 311 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 SMG8Q8ND04 991 aaKnown RBP15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 ERCC4Q92889 916 aaPredicted RBP15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 DHTKD1Q96HY7 919 aaPredicted RBP15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 RAD9AQ99638 391 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 EIF2AQ9BY44 585 aaKnown RBP15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 CDT1Q9H211 546 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 TYW1Q9NV66 732 aaKnown RBP15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 ANKFY1Q9P2R3 1169 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 GDAQ9Y2T3 454 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 INSL6Q9Y581 213 aa15.64■□□□□ 0.09
HMGXB4-204ENST00000455359 TET1Q8NFU7 2136 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 PSMA7O14818 248 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 INPPL1O15357 1258 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 LETM1O95202 739 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 LDHAP00338 332 aaKnown RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 CLTAP09496 248 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 ATF7P17544 494 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 HTRA4P83105 476 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 NFIL3Q16649 462 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 LRIT3Q3SXY7 679 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 CT47A1Q5JQC4 288 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 SLC9A9Q8IVB4 645 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 ADSSL1Q8N142 457 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 TSPAN18Q96SJ8 248 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 MSTO1Q9BUK6 570 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 CCDC94Q9BW85 323 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 KCTD10Q9H3F6 313 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 KIAA1586Q9HCI6 787 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 AGPAT3Q9NRZ7 376 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 TOPORSQ9NS56 1045 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 TRAF3IP3Q9Y228 551 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 USP20Q9Y2K6 914 aa15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.63■□□□□ 0.09
HMGXB4-204ENST00000455359 RANBP2P49792 3224 aaKnown RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 ANKRD63C9JTQ0 380 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 OGTO15294 1046 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 TGFB1I1O43294 461 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 CALUO43852 315 aaPredicted RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 DGKIO75912 1065 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 ADSSP30520 456 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 MATR3P43243 847 aaKnown RBP eCLIP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 SMAD3P84022 425 aaKnown RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 CDR2LQ86X02 465 aaPredicted RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 NELFCDQ8IXH7 590 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 MLKLQ8NB16 471 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 POMGNT1Q8WZA1 660 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 ZBTB45Q96K62 511 aaPredicted RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 ZBED2Q9BTP6 218 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 MRPL9Q9BYD2 267 aaKnown RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 TMEM117Q9H0C3 514 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 RSAD1Q9HA92 442 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 PLEKHA5Q9HAU0 1116 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 KANSL3Q9P2N6 904 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 AGO2Q9UKV8 859 aaKnown RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 COLQQ9Y215 455 aaPredicted RBP15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 PCDHA11Q9Y5I1 949 aa15.62■□□□□ 0.09
HMGXB4-204ENST00000455359 CARNS1A5YM72 827 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 FAM189A1O60320 539 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 BMP6P22004 513 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 RPL13P26373 211 aaKnown RBP15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 PRCPP42785 496 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 YARSP54577 528 aaKnown RBP15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 NFKBIBQ15653 356 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 RAB30Q15771 203 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 EDRF1Q3B7T1 1238 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 CENPPQ6IPU0 288 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 ARMCX5Q6P1M9 558 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 ZBTB33Q86T24 672 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 CD302Q8IX05 232 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 CMTR2Q8IYT2 770 aaKnown RBP15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 ABI1Q8IZP0 508 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 RNF169Q8NCN4 708 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 ZNF689Q96CS4 500 aaPredicted RBP15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 ACAP3Q96P50 834 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 YME1L1Q96TA2 773 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 NXF3Q9H4D5 531 aaKnown RBP15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 RC3H2Q9HBD1 1191 aaKnown RBP15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 DACH1Q9UI36 760 aa15.61■□□□□ 0.09
HMGXB4-204ENST00000455359 SIP14410 1827 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 SCN5AQ14524 2016 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 PPP1R3GB7ZBB8 358 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 BIN1O00499 593 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 TLL1O43897 1013 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 OFD1O75665 1012 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 UPP2O95045 317 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 LRRC63Q05C16 580 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 CAVIN1Q6NZI2 390 aaKnown RBP15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 AGMOQ6ZNB7 445 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 SMYD4Q8IYR2 804 aaPredicted RBP15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 URGCPQ8TCY9 931 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 SP7Q8TDD2 431 aaPredicted RBP15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 FBXL18Q96ME1 805 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 TSG101Q99816 390 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms