RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ABCB6Q9NP58 842 aa17.24■□□□□ 0.35
SNX17-204ENST00000453453 MOXD2PA6NHM9 499 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 KCNJ18B7U540 433 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 K7ERI5 159 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 GNA14O95837 355 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 SRGAP2CP0DJJ0 459 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 CYP2C9P11712 490 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 PHKA2P46019 1235 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 AMPD2Q01433 879 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 KCNA1Q09470 495 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 ADAM9Q13443 819 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 KCNJ12Q14500 433 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 KSR1Q8IVT5 923 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 SLC35F6Q8N357 371 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 LINC01465Q8N7H1 131 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 RNF149Q8NC42 400 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 VTI1AQ96AJ9 217 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 NLRP4Q96MN2 994 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 TMEM134Q9H6X4 195 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 HDAC6Q9UBN7 1215 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 ADGRA3Q8IWK6 1321 aa17.23■□□□□ 0.35
SNX17-204ENST00000453453 SMIM35A0A1B0GVV1 85 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 MBLAC1A4D2B0 266 aaPredicted RBP17.22■□□□□ 0.35
SNX17-204ENST00000453453 LRRC10BA6NIK2 292 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 CPP00450 1065 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 NR3C1P04150 777 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 NR2F2P24468 414 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 NOP2P46087 812 aaKnown RBP17.22■□□□□ 0.35
SNX17-204ENST00000453453 POU5F1BQ06416 359 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 MTF1Q14872 753 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 NFIL3Q16649 462 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 NBPF20Q3BBV1 942 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 TCP11X2Q5H9J9 407 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 FAM47CQ5HY64 1035 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 LHX8Q68G74 356 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 CCSAPQ6IQ19 270 aaPredicted RBP17.22■□□□□ 0.35
SNX17-204ENST00000453453 CNOT6LQ96LI5 555 aaKnown RBP17.22■□□□□ 0.35
SNX17-204ENST00000453453 SCLT1Q96NL6 688 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 UNC93B1Q9H1C4 597 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 LZTFL1Q9NQ48 299 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 RSPH14Q9UHP6 348 aa17.22■□□□□ 0.35
SNX17-204ENST00000453453 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 HNRNPDLO14979 420 aaKnown RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 ACLYP53396 1101 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 CKAP4Q07065 602 aaKnown RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 CCDC40Q4G0X9 1142 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 CDCA2Q69YH5 1023 aaPredicted RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 LRRC55Q6ZSA7 311 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 EHBP1Q8NDI1 1231 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 PPM1EQ8WY54 764 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 ZBTB10Q96DT7 871 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 GLT1D1Q96MS3 346 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 AGPAT3Q9NRZ7 376 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 PUF60Q9UHX1 559 aaKnown RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 MYO6Q9UM54 1294 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 LIG4P49917 911 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 VSNL1P62760 191 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 MYBPC2Q14324 1141 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 FBXO46Q6PJ61 603 aaPredicted RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 ZNF410Q86VK4 478 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 ZC3H3Q8IXZ2 948 aaKnown RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 C10orf67Q8IYJ2 551 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 FAM49AQ9H0Q0 323 aaPredicted RBP17.21■□□□□ 0.35
SNX17-204ENST00000453453 GTF2IRD1Q9UHL9 959 aa17.21■□□□□ 0.35
SNX17-204ENST00000453453 CLIC2O15247 247 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 SLC16A3O15427 465 aaKnown RBP17.2■□□□□ 0.34
SNX17-204ENST00000453453 TEX33O43247 280 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 VTNP04004 478 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 GYPCP04921 128 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 RPLP2P05387 115 aaKnown RBP17.2■□□□□ 0.34
SNX17-204ENST00000453453 HSPA1AP0DMV8 641 aaKnown RBP17.2■□□□□ 0.34
SNX17-204ENST00000453453 HSPA1BP0DMV9 641 aaKnown RBP17.2■□□□□ 0.34
SNX17-204ENST00000453453 EPB41P11171 864 aaKnown RBP17.2■□□□□ 0.34
SNX17-204ENST00000453453 CCL5P13501 91 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 HOXC8P31273 242 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 ARHGAP25P42331 645 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 LBX1P52954 281 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 CORO7P57737 925 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 PTENP60484 403 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 ADAM17P78536 824 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 MAPK6Q16659 721 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 TAF2Q6P1X5 1199 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 SESTD1Q86VW0 696 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 C12orf56Q8IXR9 622 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 KIAA0319LQ8IZA0 1049 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 RNF208Q9H0X6 261 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 HAUS4Q9H6D7 363 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
SNX17-204ENST00000453453 FRMD4BQ9Y2L6 1034 aa17.2■□□□□ 0.34
SNX17-204ENST00000453453 TREHO43280 583 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 GJB1P08034 283 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 CYP2J2P51589 502 aa17.19■□□□□ 0.34
SNX17-204ENST00000453453 PTPN11Q06124 597 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms