RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 FZD8Q9H461 694 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 DZANK1Q9NVP4 752 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 DNM3Q9UQ16 869 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 SSX2IPQ9Y2D8 614 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 ZDBF2Q9HCK1 2354 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 ACKR2O00590 384 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 C2CD2LO14523 706 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 N4BP3O15049 544 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 SOD2P04179 222 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 URODP06132 367 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 KLRC2P26717 231 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 PRPHP41219 470 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 DSC1Q08554 894 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 CABP7Q86V35 215 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 NECTIN4Q96NY8 510 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 ADPGKQ9BRR6 497 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 COLEC11Q9BWP8 271 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.23□□□□□ -0.13
CHD3-206ENST00000452447 MIOSQ9NXC5 875 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 KLK14Q9P0G3 267 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 SMC3Q9UQE7 1217 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 MYH11P35749 1972 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 TRIP11Q15643 1979 aa14.23□□□□□ -0.13
CHD3-206ENST00000452447 CD2BP2O95400 341 aaKnown RBP14.22□□□□□ -0.13
CHD3-206ENST00000452447 PRKCBP05771 671 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 EPCAMP16422 314 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 EFNA5P52803 228 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 EDAQ92838 391 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 RIPOR3Q96MK2 946 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 POLD4Q9HCU8 107 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 NR2E1Q9Y466 385 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.22□□□□□ -0.13
CHD3-206ENST00000452447 ZMYM2Q9UBW7 1377 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 WDFY4Q6ZS81 3184 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 CNPP09543 421 aaKnown RBP14.22□□□□□ -0.13
CHD3-206ENST00000452447 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
CHD3-206ENST00000452447 CDC25AP30304 524 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 MTHFRP42898 656 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 GRIK3Q13003 919 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
CHD3-206ENST00000452447 ATAT1Q5SQI0 421 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 RARS2Q5T160 578 aaKnown RBP14.22□□□□□ -0.13
CHD3-206ENST00000452447 GSTCDQ8NEC7 633 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 SLC22A17Q8WUG5 538 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 KLHL5Q96PQ7 755 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 KIFC3Q9BVG8 833 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 PDZD7Q9H5P4 517 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 MARCH5Q9NX47 278 aa14.22□□□□□ -0.13
CHD3-206ENST00000452447 TTLL13PA6NNM8 815 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 PP2D1A8MPX8 630 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 E9PMD0 336 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 K7ERI5 159 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 GLUD2P49448 558 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 IL17AQ16552 155 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 ZBTB33Q86T24 672 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 C12orf76Q8N812 135 aaPredicted RBP14.21□□□□□ -0.14
CHD3-206ENST00000452447 FAM122AQ96E09 287 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 FBXL18Q96ME1 805 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 TBC1D32Q96NH3 1257 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 HERC2P3Q9BVR0 1158 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 CCDC113Q9H0I3 377 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 POMKQ9H5K3 350 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 SNTG2Q9NY99 539 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 CDH22Q9UJ99 828 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 USP20Q9Y2K6 914 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 ARIH1Q9Y4X5 557 aaPredicted RBP14.21□□□□□ -0.14
CHD3-206ENST00000452447 ZNF318Q5VUA4 2279 aa14.21□□□□□ -0.14
CHD3-206ENST00000452447 CCDC169A6NNP5 214 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 LILRB3O75022 631 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 ADH1AP07327 375 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 WEE2P0C1S8 567 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 CLCN4P51793 760 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 PEX3P56589 373 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 ATP2C1P98194 919 aaPredicted RBP14.2□□□□□ -0.14
CHD3-206ENST00000452447 DMP1Q13316 513 aaPredicted RBP14.2□□□□□ -0.14
CHD3-206ENST00000452447 DCAF4L1Q3SXM0 396 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 LARP1BQ659C4 914 aaKnown RBP14.2□□□□□ -0.14
CHD3-206ENST00000452447 TMC5Q6UXY8 1006 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 TAS1R1Q7RTX1 841 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 APBB1IPQ7Z5R6 666 aaPredicted RBP14.2□□□□□ -0.14
CHD3-206ENST00000452447 SFXN1Q9H9B4 322 aa14.2□□□□□ -0.14
CHD3-206ENST00000452447 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
CHD3-206ENST00000452447 MTCL1Q9Y4B5 1905 aaKnown RBP14.19□□□□□ -0.14
CHD3-206ENST00000452447 VWA3AA6NCI4 1184 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 TADA2AO75478 443 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 RECQL4O94761 1208 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 THP07101 528 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 TUSC3Q13454 348 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 USP41Q3LFD5 358 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 FUT10Q6P4F1 479 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 ELMSAN1Q6PJG2 1045 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 TRIM67Q6ZTA4 783 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 CDK5RAP3Q96JB5 506 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 DRC1Q96MC2 740 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 MFSD14AQ96MC6 490 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 DPP7Q9UHL4 492 aa14.19□□□□□ -0.14
CHD3-206ENST00000452447 ADAM28Q9UKQ2 775 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms