RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 DNAJB1P25685 340 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 TMEM132AQ24JP5 1023 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 GLB1LQ6UWU2 654 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 HAUS6Q7Z4H7 955 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 PYM1Q9BRP8 204 aaKnown RBP21.92■■□□□ 1.1
COL9A3-202ENST00000452372 PLVAPQ9BX97 442 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 LRRC27Q9C0I9 530 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 LMAN2LQ9H0V9 348 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 ZHX3Q9H4I2 956 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 ALG13Q9NP73 1137 aaKnown RBP21.92■■□□□ 1.1
COL9A3-202ENST00000452372 UBN1Q9NPG3 1134 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 KCNH3Q9ULD8 1083 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 NPTXRO95502 500 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 ITGA4P13612 1032 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 HYAL1Q12794 435 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 ATF7IP2Q5U623 682 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 PTCRAQ6ISU1 281 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-202ENST00000452372 LRRC55Q6ZSA7 311 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 HACE1Q8IYU2 909 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 LRRC43Q8N309 656 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 SPPL3Q8TCT6 385 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 P2RX5Q93086 422 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 FIZ1Q96SL8 496 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 ACO2Q99798 780 aaKnown RBP21.91■■□□□ 1.1
COL9A3-202ENST00000452372 ADPGKQ9BRR6 497 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 MRPL9Q9BYD2 267 aaKnown RBP21.91■■□□□ 1.1
COL9A3-202ENST00000452372 MRPL4Q9BYD3 311 aaKnown RBP21.91■■□□□ 1.1
COL9A3-202ENST00000452372 RNF39Q9H2S5 420 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 CWH43Q9H720 699 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 RSAD1Q9HA92 442 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 GDPD2Q9HCC8 539 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 TNFSF13BQ9Y275 285 aa21.91■■□□□ 1.1
COL9A3-202ENST00000452372 ITGB1P05556 798 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 AMPD3Q01432 767 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 STRN3Q13033 797 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 EEF1DP3Q658K8 133 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 STAMQ92783 540 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 C1QTNF1Q9BXJ1 281 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 MAGEF1Q9HAY2 307 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 HES2Q9Y543 173 aa21.9■■□□□ 1.1
COL9A3-202ENST00000452372 FAM237AA0A1B0GTK4 181 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 A0A1B0GVL5 298 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 A0A1W2PQ27 194 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 A0A1W2PQ64 194 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 A0A1W2PQD8 194 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 GAP43P17677 238 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 GTF2F1P35269 517 aaKnown RBP eCLIP21.89■■□□□ 1.097e-7■■■■□ 19.9
COL9A3-202ENST00000452372 DLX2Q07687 328 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-202ENST00000452372 NOMO2Q5JPE7 1267 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 SPOUT1Q5T280 376 aaKnown RBP21.89■■□□□ 1.09
COL9A3-202ENST00000452372 TARS2Q9BW92 718 aaKnown RBP21.89■■□□□ 1.09
COL9A3-202ENST00000452372 NXF3Q9H4D5 531 aaKnown RBP21.89■■□□□ 1.09
COL9A3-202ENST00000452372 PTPRHQ9HD43 1115 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 C11orf16Q9NQ32 467 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 AAASQ9NRG9 546 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 HCSTQ9UBK5 93 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 SEL1LQ9UBV2 794 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 HPSEQ9Y251 543 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 GIT1Q9Y2X7 761 aa21.89■■□□□ 1.09
COL9A3-202ENST00000452372 FRMD3A2A2Y4 597 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 K7ENM7 598 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 PFKFB1P16118 471 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 NMT1P30419 496 aaKnown RBP21.88■■□□□ 1.09
COL9A3-202ENST00000452372 ABCD1P33897 745 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 GTF2BQ00403 316 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 DCAF4L1Q3SXM0 396 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 CNNM4Q6P4Q7 775 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 APBB1IPQ7Z5R6 666 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-202ENST00000452372 GJD3Q8N144 294 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 KLHL23Q8NBE8 558 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 ST6GALNAC4Q9H4F1 302 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 TBC1D13Q9NVG8 400 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 CLDND1Q9NY35 253 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 KANSL3Q9P2N6 904 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 TBX20Q9UMR3 447 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 INPP5FQ9Y2H2 1132 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 PCDHB12Q9Y5F1 795 aa21.88■■□□□ 1.09
COL9A3-202ENST00000452372 PI4K2BG5E9Z4 385 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 INPPL1O15357 1258 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 IDEP14735 1019 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 LAG3P18627 525 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 PROZP22891 400 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 PUS10Q3MIT2 529 aaKnown RBP21.87■■□□□ 1.09
COL9A3-202ENST00000452372 ZPBP2Q6X784 338 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 ZNF720Q7Z2F6 126 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 SFR1Q86XK3 245 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 COLGALT1Q8NBJ5 622 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 URGCPQ8TCY9 931 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 C7orf25Q9BPX7 421 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 LRFN3Q9BTN0 628 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 APOL6Q9BWW8 343 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 TRIM9Q9C026 710 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 PANK4Q9NVE7 773 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 CHMP5Q9NZZ3 219 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 PLXNA4Q9HCM2 1894 aa21.87■■□□□ 1.09
COL9A3-202ENST00000452372 ARL5CA6NH57 179 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 LINC01565O15544 149 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 NCK2O43639 380 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 SLFN14P0C7P3 912 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 AKAP5P24588 427 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms