RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 BRD3Q15059 726 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 PPP2R5AQ15172 486 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 ZNF746Q6NUN9 644 aaPredicted RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 C12orf56Q8IXR9 622 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 RNF10Q8N5U6 811 aaKnown RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 SPAG5Q96R06 1193 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 PNKPQ96T60 521 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 FRMD4BQ9Y2L6 1034 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 ZEB2O60315 1214 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 PRLRP16471 622 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 PTK2Q05397 1052 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 CKAP4Q07065 602 aaKnown RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 LRRC26Q2I0M4 334 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 IQCEQ6IPM2 695 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 METTL7BQ6UX53 244 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 ZNF571Q7Z3V5 609 aaPredicted RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 SYCP3Q8IZU3 236 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 KRT222Q8N1A0 295 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 PPTC7Q8NI37 304 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 ALS2CR12Q96Q35 445 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 ACCSQ96QU6 501 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 TMEM206Q9H813 350 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 LUC7LQ9NQ29 371 aaKnown RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
PKP4-206ENST00000452162 TRIP12Q14669 1992 aaPredicted RBP11.63□□□□□ -0.55
PKP4-206ENST00000452162 ATP8B1O43520 1251 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 ANXA13P27216 316 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 GTF2BQ00403 316 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 NAB2Q15742 525 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
PKP4-206ENST00000452162 UTP14CQ5TAP6 766 aaKnown RBP11.63□□□□□ -0.55
PKP4-206ENST00000452162 PLA2G4FQ68DD2 849 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 SLC39A5Q6ZMH5 540 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 PPP1R13LQ8WUF5 828 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 VTI1AQ96AJ9 217 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 RPGRIP1Q96KN7 1286 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 GLT1D1Q96MS3 346 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 NOX5Q96PH1 765 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 SH2D3AQ9BRG2 576 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 STARD7Q9NQZ5 370 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 NENFQ9UMX5 172 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 ARID2Q68CP9 1835 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 PDE2AO00408 941 aaPredicted RBP11.63□□□□□ -0.55
PKP4-206ENST00000452162 ZNF185O15231 689 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 TRIM49P0CI25 452 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 TRIM49CP0CI26 452 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 NCKAP1LP55160 1127 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 BFSP1Q12934 665 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 CBWD6Q4V339 395 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 CBWD3Q5JTY5 395 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 CBWD5Q5RIA9 395 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 GJB7Q6PEY0 223 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 ZNF572Q7Z3I7 529 aaPredicted RBP11.63□□□□□ -0.55
PKP4-206ENST00000452162 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
PKP4-206ENST00000452162 CAPZA3Q96KX2 299 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 CCDC43Q96MW1 224 aaKnown RBP11.63□□□□□ -0.55
PKP4-206ENST00000452162 ARFGAP3Q9NP61 516 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 GPRC5CQ9NQ84 441 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 ADAMTS1Q9UHI8 967 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 PCDHA10Q9Y5I2 948 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 KAT6AQ92794 2004 aa11.63□□□□□ -0.55
PKP4-206ENST00000452162 MYH9P35579 1960 aaKnown RBP11.62□□□□□ -0.55
PKP4-206ENST00000452162 GRIN2DO15399 1336 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 ATP8B3O60423 1300 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 NFASCO94856 1347 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 TISP43B9A030 160 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 NOP56O00567 594 aaKnown RBP11.62□□□□□ -0.55
PKP4-206ENST00000452162 EXOC3O60645 756 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 STBD1O95210 358 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 RHOXF2BP0C7M4 288 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 ZNF286BP0CG31 522 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 HOXD8P13378 290 aaPredicted RBP11.62□□□□□ -0.55
PKP4-206ENST00000452162 NPEPPSP55786 919 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 ENOX2Q16206 610 aaKnown RBP11.62□□□□□ -0.55
PKP4-206ENST00000452162 DGKDQ16760 1214 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 XKR9Q5GH70 373 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 ANO5Q75V66 913 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 GPR20Q99678 358 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 RHOXF2Q9BQY4 288 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.62□□□□□ -0.55
PKP4-206ENST00000452162 HTATIP2Q9BUP3 242 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 BTNL10A8MVZ5 291 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 PPFIA4O75335 1185 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 SASH3O75995 380 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 KLRC1P26715 233 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 MYL7Q01449 175 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 C10orf76Q5T2E6 689 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 HAUS6Q7Z4H7 955 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 SMAP1Q8IYB5 467 aaPredicted RBP11.62□□□□□ -0.55
PKP4-206ENST00000452162 OLIG1Q8TAK6 271 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 DPF3Q92784 378 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 KAT2BQ92831 832 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 MTG1Q9BT17 334 aaPredicted RBP11.62□□□□□ -0.55
PKP4-206ENST00000452162 TLR10Q9BXR5 811 aa11.62□□□□□ -0.55
PKP4-206ENST00000452162 PACSIN1Q9BY11 444 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms