RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 BDP1A6H8Y1 2624 aa10.68□□□□□ -0.7
USP54-207ENST00000451492 PHLPP2Q6ZVD8 1323 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 NPHP3-ACAD11A0A0J9YXS1 232 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 A0A1B0GUA9 196 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 SFI1A8K8P3 1242 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 CLASP2O75122 1294 aaKnown RBP10.67□□□□□ -0.7
USP54-207ENST00000451492 MYBP10242 640 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 GRIN1Q05586 938 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 DMP1Q13316 513 aaPredicted RBP10.67□□□□□ -0.7
USP54-207ENST00000451492 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
USP54-207ENST00000451492 SF3A1Q15459 793 aaKnown RBP10.67□□□□□ -0.7
USP54-207ENST00000451492 RINT1Q6NUQ1 792 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 ANKRD54Q6NXT1 300 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 FAM173BQ6P4H8 233 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 DDX53Q86TM3 631 aaKnown RBP10.67□□□□□ -0.7
USP54-207ENST00000451492 GLYCTKQ8IVS8 523 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 ADHFE1Q8IWW8 467 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 COLGALT2Q8IYK4 626 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 RSPH1Q8WYR4 309 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 RPGRIP1Q96KN7 1286 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 B3GALT6Q96L58 329 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 CXCL16Q9H2A7 254 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 FZD8Q9H461 694 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 TSHZ2Q9NRE2 1034 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 MARCH5Q9NX47 278 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 GIT1Q9Y2X7 761 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 HCFC2Q9Y5Z7 792 aa10.67□□□□□ -0.7
USP54-207ENST00000451492 TTC28Q96AY4 2481 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 MTCL1Q9Y4B5 1905 aaKnown RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 FSD2A1L4K1 749 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 CASTOR2A6NHX0 329 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 K7ELQ4 463 aaPredicted RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 K7ERI5 159 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 ACKR2O00590 384 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 SLC16A4O15374 487 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 RECQL4O94761 1208 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 ALDH2P05091 517 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 WEE2P0C1S8 567 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 PLA2G4BP0C869 781 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 CTSAP10619 480 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 EPCAMP16422 314 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 NPTX2P47972 431 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 OSTNP61366 133 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 GRIK3Q13003 919 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 COASYQ13057 564 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 KARSQ15046 597 aaKnown RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 PTPN14Q15678 1187 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 FAM187BQ17R55 369 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 GLRA4Q5JXX5 417 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 SPECC1Q5M775 1068 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 RARS2Q5T160 578 aaKnown RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 ATF7IP2Q5U623 682 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 FOXD4L5Q5VV16 416 aaPredicted RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 KANK3Q6NY19 840 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 TAS1R1Q7RTX1 841 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 DAW1Q8N136 415 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 C12orf76Q8N812 135 aaPredicted RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 CEP120Q8N960 986 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 MRPL43Q8N983 215 aaKnown RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 FOXD4L4Q8WXT5 416 aaPredicted RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 CASP10Q92851 521 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 DRC1Q96MC2 740 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 POP1Q99575 1024 aaKnown RBP10.66□□□□□ -0.7
USP54-207ENST00000451492 TMEM175Q9BSA9 504 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 NT5C3AQ9H0P0 336 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 KMT5AQ9NQR1 393 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 PRKAG3Q9UGI9 489 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 CLIC4Q9Y696 253 aa10.66□□□□□ -0.7
USP54-207ENST00000451492 TRIOO75962 3097 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 NR1I2O75469 434 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 SOD2P04179 222 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 URODP06132 367 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 PLCG1P19174 1290 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 PDCP20941 246 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 SYT1P21579 422 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 KLRC2P26717 231 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 MARCKSP29966 332 aaPredicted RBP10.65□□□□□ -0.7
USP54-207ENST00000451492 UBA7P41226 1012 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 MATR3P43243 847 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP54-207ENST00000451492 EFNA5P52803 228 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 DSC1Q08554 894 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 MAPK7Q13164 816 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 DCAF4L1Q3SXM0 396 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 ZNF568Q3ZCX4 644 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 TMEM119Q4V9L6 283 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 NT5DC1Q5TFE4 455 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 ARL6IP4Q66PJ3 421 aaKnown RBP10.65□□□□□ -0.7
USP54-207ENST00000451492 SYCE2Q6PIF2 218 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 C1orf186Q6ZWK4 172 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 GPBP1Q86WP2 473 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 SPRYD3Q8NCJ5 442 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 FEZF2Q8TBJ5 459 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 LRRC15Q8TF66 581 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 CALML4Q96GE6 196 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 PAAF1Q9BRP4 392 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 HERC2P3Q9BVR0 1158 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 ZHX3Q9H4I2 956 aa10.65□□□□□ -0.7
USP54-207ENST00000451492 MRPL17Q9NRX2 175 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms