RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 KCNG1Q9UIX4 513 aa17.09■□□□□ 0.33
LIMS1-210ENST00000449684 PHLPP2Q6ZVD8 1323 aa17.09■□□□□ 0.33
LIMS1-210ENST00000449684 NPTX2P47972 431 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 SMTNP53814 917 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 RAD51AP2Q09MP3 1159 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 HYIQ5T013 277 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 ANKRD54Q6NXT1 300 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 KCNK18Q7Z418 384 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 COLGALT2Q8IYK4 626 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 BCL7CQ8WUZ0 217 aaPredicted RBP17.08■□□□□ 0.32
LIMS1-210ENST00000449684 EMILIN2Q9BXX0 1053 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 CCDC113Q9H0I3 377 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 CD320Q9NPF0 282 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.32
LIMS1-210ENST00000449684 MIOSQ9NXC5 875 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.32
LIMS1-210ENST00000449684 USP20Q9Y2K6 914 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.32
LIMS1-210ENST00000449684 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
LIMS1-210ENST00000449684 GTF3C3Q9Y5Q9 886 aa17.08■□□□□ 0.32
LIMS1-210ENST00000449684 INPPL1O15357 1258 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 SLC26A4O43511 780 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 B4GALT3O60512 393 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 CLASP2O75122 1294 aaKnown RBP17.07■□□□□ 0.32
LIMS1-210ENST00000449684 URODP06132 367 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 HSP90AA1P07900 732 aaKnown RBP17.07■□□□□ 0.32
LIMS1-210ENST00000449684 PLA2G4BP0C869 781 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 HOXB8P17481 243 aaPredicted RBP17.07■□□□□ 0.32
LIMS1-210ENST00000449684 SYT1P21579 422 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
LIMS1-210ENST00000449684 ZP2Q05996 745 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 GRIK3Q13003 919 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 KIAA1841Q6NSI8 718 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 TMEM184AQ6ZMB5 413 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 SYT2Q8N9I0 419 aaPredicted RBP17.07■□□□□ 0.32
LIMS1-210ENST00000449684 VN1R2Q8NFZ6 395 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 TCHPQ9BT92 498 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 APOL5Q9BWW9 433 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 SNTG2Q9NY99 539 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 SSX2IPQ9Y2D8 614 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 HCFC2Q9Y5Z7 792 aa17.07■□□□□ 0.32
LIMS1-210ENST00000449684 ZMYM2Q9UBW7 1377 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 TTLL13PA6NNM8 815 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 SFI1A8K8P3 1242 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 C2CD2LO14523 706 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 KRT18P05783 430 aaKnown RBP17.06■□□□□ 0.32
LIMS1-210ENST00000449684 ALADP13716 330 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 GUCY2CP25092 1073 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 KLRC2P26717 231 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 STRN3Q13033 797 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
LIMS1-210ENST00000449684 EEF1DP3Q658K8 133 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 CES5AQ6NT32 575 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 PPFIBP1Q86W92 1011 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 MRPL4Q9BYD3 311 aaKnown RBP17.06■□□□□ 0.32
LIMS1-210ENST00000449684 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 KCND2Q9NZV8 630 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 IRAK3Q9Y616 596 aa17.06■□□□□ 0.32
LIMS1-210ENST00000449684 SLC16A4O15374 487 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 TADA2AO75478 443 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 RECQL4O94761 1208 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 SOD2P04179 222 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 THP07101 528 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
LIMS1-210ENST00000449684 DSC1Q08554 894 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 NT5DC1Q5TFE4 455 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 DAW1Q8N136 415 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 EPHX3Q9H6B9 360 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 LARSQ9P2J5 1176 aaKnown RBP17.05■□□□□ 0.32
LIMS1-210ENST00000449684 TNFSF13BQ9Y275 285 aa17.05■□□□□ 0.32
LIMS1-210ENST00000449684 TDRD15B5MCY1 1934 aaKnown RBP17.05■□□□□ 0.32
LIMS1-210ENST00000449684 MUC3AQ02505 3323 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 PLS3P13797 630 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 GLUD2P49448 558 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 SLC12A3P55017 1021 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 CEBPZQ03701 1054 aaKnown RBP17.04■□□□□ 0.32
LIMS1-210ENST00000449684 TUSC3Q13454 348 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 KCNC3Q14003 757 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 TMEM119Q4V9L6 283 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 RPGRIP1Q96KN7 1286 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 HERC2P3Q9BVR0 1158 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 CCDC94Q9BW85 323 aaPredicted RBP17.04■□□□□ 0.32
LIMS1-210ENST00000449684 PHF7Q9BWX1 381 aaPredicted RBP17.04■□□□□ 0.32
LIMS1-210ENST00000449684 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
LIMS1-210ENST00000449684 DZANK1Q9NVP4 752 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 MARCH5Q9NX47 278 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 CLIC4Q9Y696 253 aa17.04■□□□□ 0.32
LIMS1-210ENST00000449684 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms