RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 EEF2KMTQ96G04 330 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 TIPINQ9BVW5 301 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 SKIP12755 728 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CERKLQ49MI3 558 aaPredicted RBP14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 SPDYCQ5MJ68 293 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 FAM83BQ5T0W9 1011 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 KCTD1Q719H9 257 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 DCAF4Q8WV16 495 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CRYGNQ8WXF5 182 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CCDC134Q9H6E4 229 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 TDRD3Q9H7E2 651 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 KANSL2Q9H9L4 492 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 FGFR1OP2Q9NVK5 253 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 ATP8A1Q9Y2Q0 1164 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 DAAM1Q9Y4D1 1078 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 SMIM23A6NLE4 172 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 DAPK3O43293 454 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CEP104O60308 925 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 OAS1P00973 400 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 VIL1P09327 827 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 SLC16A2P36021 539 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 SMC1BQ8NDV3 1235 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 C17orf50Q8WW18 174 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 HIC2Q96JB3 615 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 PARP2Q9UGN5 583 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 INTUQ9ULD6 942 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CNTNAP1P78357 1384 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 ATP8B3O60423 1300 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CALUO43852 315 aaPredicted RBP14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CCDC166P0CW27 439 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CCNB1P14635 433 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 POLR2FP61218 127 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 CBX3Q13185 183 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 SH2D4BQ5SQS7 431 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 LZICQ8WZA0 190 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 AZIN2Q96A70 460 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 NLRC4Q9NPP4 1024 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 ARL2BPQ9Y2Y0 163 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 SLC4A7Q9Y6M7 1214 aa14.41□□□□□ -0.1
SYNGAP1-204ENST00000449372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 KCNK3O14649 394 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 ATP9AO75110 1047 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 PEX26Q7Z412 305 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 ZNF333Q96JL9 665 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 NMRK1Q9NWW6 199 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 PDP2Q9P2J9 529 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 PAIP2BQ9ULR5 123 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 USH1CQ9Y6N9 552 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 MAGEA13PA6NCF6 341 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 UNC5CO95185 931 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 GM2AP17900 193 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 SESN3P58005 492 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 TMEM179Q6ZVK1 233 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 ZC3H18Q86VM9 953 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 TDP2O95551 362 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 HSPA6P17066 643 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 STXBP4Q6ZWJ1 553 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 ENDOVQ8N8Q3 282 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 GMCL1Q96IK5 515 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 PGAP2Q9UHJ9 254 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 LNPEPQ9UIQ6 1025 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 CHMP2BQ9UQN3 213 aa14.4□□□□□ -0.1
SYNGAP1-204ENST00000449372 TMEM221A6NGB7 291 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 O00370 1275 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 RGS16O15492 202 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 E2F6O75461 281 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 TJP3O95049 919 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 H2AFZP0C0S5 128 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 FCER1AP12319 257 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 SKIV2L2P42285 1042 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 SLC1A4P43007 532 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 GFPT1Q06210 699 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 H2AFVQ71UI9 128 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 DYMQ7RTS9 669 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 HAS1Q92839 578 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 PNMA5Q96PV4 448 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 P2RX7Q99572 595 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 CCDC113Q9H0I3 377 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 MTRF1LQ9UGC7 380 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 IFI35P80217 286 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 GRB10Q13322 594 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 RSBN1LQ6PCB5 846 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 ATP8B4Q8TF62 1192 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 MBOAT7Q96N66 472 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 RUNDC3BQ96NL0 473 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 SPATA16Q9BXB7 569 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 BLOC1S4Q9NUP1 217 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 SPATA7Q9P0W8 599 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 TMEM59LQ9UK28 342 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 SYNPO2Q9UMS6 1093 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 WDR37Q9Y2I8 494 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 CCDC169A6NNP5 214 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 TCP11X1B4DZS4 312 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 PARP6Q2NL67 630 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 MEI1Q5TIA1 1274 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 FAM13CQ8NE31 585 aa14.39□□□□□ -0.11
SYNGAP1-204ENST00000449372 VTI1AQ96AJ9 217 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms