RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 KRT13P13646 458 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 PRMT2P55345 433 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 SP3Q02447 781 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 KIF22Q14807 665 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 RBBP5Q15291 538 aaKnown RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 DENND2CQ68D51 928 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 SNRNP48Q6IEG0 339 aaKnown RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 CENPPQ6IPU0 288 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 FAM43BQ6ZT52 329 aaPredicted RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 CEP120Q8N960 986 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 C1orf131Q8NDD1 294 aaKnown RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 PIGSQ96S52 555 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 MOV10L1Q9BXT6 1211 aaKnown RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 CCSER1Q9C0I3 900 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 CCPG1Q9ULG6 757 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 PCDHA6Q9UN73 950 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 TRIM33Q9UPN9 1127 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 PCDHGC5Q9Y5F6 944 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 PCDHA8Q9Y5H6 950 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 PFASO15067 1338 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 M0R2N6 131 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 OR52Z1P0C646 297 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 NQO1P15559 274 aaKnown RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 LACTBP83111 547 aaPredicted RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 MKRN4PQ13434 485 aaPredicted RBP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 MCF2L2Q86YR7 1114 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 SLC17A8Q8NDX2 589 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.74□□□□□ -1.01
LINC00954-202ENST00000449086 ACAD9Q9H845 621 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 CEP72Q9P209 647 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 CPA4Q9UI42 421 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 SNX24Q9Y343 169 aa8.74□□□□□ -1.01
LINC00954-202ENST00000449086 MYMKA6NI61 221 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 SLC15A5A6NIM6 579 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 MARCH6O60337 910 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 SMIM24O75264 130 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 KRT16P08779 473 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ACTN1P12814 892 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 PCK1P35558 622 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 CTCFP49711 727 aaPredicted RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 FCGRTP55899 365 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ATP11AP98196 1134 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 PTK2Q05397 1052 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 NUGGCQ68CJ6 796 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ANKRD42Q8N9B4 389 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 SOCS4Q8WXH5 440 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 GLG1Q92896 1179 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 NSRP1Q9H0G5 558 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 RAVER2Q9HCJ3 691 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 BARHL2Q9NY43 387 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 DBR1Q9UK59 544 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 MGAMO43451 1857 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ATP2A2P16615 1042 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 USP11P51784 963 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 NAPAP54920 295 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 SLC29A2Q14542 456 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 Q3C1V9 767 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ANKRD20A2Q5SQ80 823 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ANKRD20A1Q5TYW2 823 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ANKRD20A3Q5VUR7 823 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 TCERG1LQ5VWI1 586 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ARMC3Q5W041 872 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 GALNT17Q6IS24 598 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 MIS18BP1Q6P0N0 1132 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 CRELD2Q6UXH1 353 aaPredicted RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 CCHCR1Q8TD31 782 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 OSBPL1AQ9BXW6 950 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ZMYND12Q9H0C1 365 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 KCNK9Q9NPC2 374 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 SEPT11Q9NVA2 429 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 FGFR1OP2Q9NVK5 253 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 CFAP73A6NFT4 308 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 POTEMA6NI47 508 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 PAEPP09466 180 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ABCB4P21439 1286 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 HOXD10P28358 340 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 PPP1R2P41236 205 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ZNF211Q13398 564 aaPredicted RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 LLGL1Q15334 1064 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ALKBH5Q6P6C2 394 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 CCDC174Q6PII3 467 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 PLEKHH3Q7Z736 793 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 NEK9Q8TD19 979 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 EPS8L3Q8TE67 593 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 SCFD2Q8WU76 684 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 PBKQ96KB5 322 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 ZNF317Q96PQ6 595 aaPredicted RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 C7orf25Q9BPX7 421 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 LBHD1Q9BQE6 289 aaPredicted RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 SLC12A4Q9UP95 1085 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 DIS3Q9Y2L1 958 aaKnown RBP8.73□□□□□ -1.01
LINC00954-202ENST00000449086 NR2E1Q9Y466 385 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 PCDHA1Q9Y5I3 950 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 COL4A3BPQ9Y5P4 624 aa8.73□□□□□ -1.01
LINC00954-202ENST00000449086 GOLGA6L10A0A0M3HER8 536 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 TCP11X1B4DZS4 312 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 H0Y3Z8 333 aa8.72□□□□□ -1.01
LINC00954-202ENST00000449086 STXBP3O00186 592 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms