RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TCF25Q9BQ70 676 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 GBP3Q9H0R5 595 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 CD320Q9NPF0 282 aa15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 DAXXQ9UER7 740 aaPredicted RBP15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 RBM19Q9Y4C8 960 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-204ENST00000449062 ZMYM2Q9UBW7 1377 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 N4BP3O15049 544 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 PLS3P13797 630 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 IL9P15248 144 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 PLCG1P19174 1290 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 DDIT3P35638 169 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 MLH1P40692 756 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 NASPP49321 788 aaPredicted RBP15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 SCNN1GP51170 649 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 KARSQ15046 597 aaKnown RBP15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 NAB2Q15742 525 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 PUS10Q3MIT2 529 aaKnown RBP15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 TMC7Q7Z402 723 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 VPS52Q8N1B4 723 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 TMEM161BQ8NDZ6 487 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 PPP2R3CQ969Q6 453 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 CLIC6Q96NY7 704 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 CDCA3Q99618 268 aaPredicted RBP15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 ACO2Q99798 780 aaKnown RBP15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 ZBP1Q9H171 429 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 TNFSF13BQ9Y275 285 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 FAN1Q9Y2M0 1017 aa15.5■□□□□ 0.07
RTFDC1-204ENST00000449062 CCDC169A6NNP5 214 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 TNFRSF10AO00220 468 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 SLC16A4O15374 487 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 CXCL14O95715 111 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 SSBP05455 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 PROZP22891 400 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 ZNF131P52739 623 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 RAD51AP2Q09MP3 1159 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 COASYQ13057 564 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 GIT2Q14161 759 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 MCM6Q14566 821 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 SPECC1Q5M775 1068 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 ATF7IP2Q5U623 682 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 PLPP4Q5VZY2 271 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 RNF168Q8IYW5 571 aaPredicted RBP15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 RAD54LQ92698 747 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 CALML4Q96GE6 196 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 CDK5RAP3Q96JB5 506 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 APOL6Q9BWW8 343 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 TRIM6Q9C030 488 aaPredicted RBP15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 KMT5AQ9NQR1 393 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 MARCH5Q9NX47 278 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 KLK14Q9P0G3 267 aa15.49■□□□□ 0.07
RTFDC1-204ENST00000449062 F8W810 466 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 PTGESO14684 152 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 MBTPS2O43462 519 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 BRD1O95696 1058 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 CTSAP10619 480 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 MAPTP10636 758 aaKnown RBP15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 LIG1P18858 919 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 CEBPZQ03701 1054 aaKnown RBP15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 DMP1Q13316 513 aaPredicted RBP15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 SMAD2Q15796 467 aaKnown RBP15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 ALKAL1Q6UXT8 129 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 TAS1R1Q7RTX1 841 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 HACE1Q8IYU2 909 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 LINC00301Q8NCQ3 95 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 AUTS2Q8WXX7 1259 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 FIZ1Q96SL8 496 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 TARS2Q9BW92 718 aaKnown RBP15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 S1PR5Q9H228 398 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 ENTPD7Q9NQZ7 604 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 PARP2Q9UGN5 583 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 KCNG1Q9UIX4 513 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 C5orf42Q9H799 3197 aa15.48■□□□□ 0.07
RTFDC1-204ENST00000449062 C19orf67A6NJJ6 358 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 CLASP2O75122 1294 aaKnown RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 PDIA4P13667 645 aaKnown RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 SMC1AQ14683 1233 aaKnown RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 XKR4Q5GH76 650 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 GPBP1Q86WP2 473 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 HSCBQ8IWL3 235 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 SMRP1Q8NCR6 262 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 ZBTB45Q96K62 511 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 FAM193BQ96PV7 902 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 REEP2Q9BRK0 252 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 CDT1Q9H211 546 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 TFIP11Q9UBB9 837 aaKnown RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 CD207Q9UJ71 328 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 ODF2LQ9ULJ1 636 aa15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 BARX2Q9UMQ3 279 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-204ENST00000449062 PHLPP2Q6ZVD8 1323 aa15.46■□□□□ 0.07
RTFDC1-204ENST00000449062 RECQL4O94761 1208 aa15.46■□□□□ 0.07
RTFDC1-204ENST00000449062 NCKAP1LP55160 1127 aa15.46■□□□□ 0.07
RTFDC1-204ENST00000449062 GRIK3Q13003 919 aa15.46■□□□□ 0.07
RTFDC1-204ENST00000449062 SMAD4Q13485 552 aaKnown RBP15.46■□□□□ 0.07
RTFDC1-204ENST00000449062 PTPN14Q15678 1187 aa15.46■□□□□ 0.07
RTFDC1-204ENST00000449062 CLUL1Q15846 466 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms