RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TMEM184AQ6ZMB5 413 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 C1orf186Q6ZWK4 172 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 MICAL1Q8TDZ2 1067 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
USP39-206ENST00000448971 RAD54LQ92698 747 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 LPPQ93052 612 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 PGBD4Q96DM1 585 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 CCDC51Q96ER9 411 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 EPSTI1Q96J88 318 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 PRIMPOLQ96LW4 560 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 MRPL9Q9BYD2 267 aaKnown RBP16.06■□□□□ 0.16
USP39-206ENST00000448971 CCSER1Q9C0I3 900 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 S1PR5Q9H228 398 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 TYW1Q9NV66 732 aaKnown RBP16.06■□□□□ 0.16
USP39-206ENST00000448971 KCND2Q9NZV8 630 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 HCSTQ9UBK5 93 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 INPP5FQ9Y2H2 1132 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 PCDHB2Q9Y5E7 798 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 PCDHB12Q9Y5F1 795 aa16.06■□□□□ 0.16
USP39-206ENST00000448971 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
USP39-206ENST00000448971 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 FSCN2O14926 492 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 FGF18O76093 207 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 ARF4P18085 180 aaPredicted RBP16.05■□□□□ 0.16
USP39-206ENST00000448971 HOXA11P31270 313 aaPredicted RBP16.05■□□□□ 0.16
USP39-206ENST00000448971 MCM6Q14566 821 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 AMHR2Q16671 573 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 DUSP6Q16828 381 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 CLLU1OSQ5K130 101 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 USP49Q70CQ1 688 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 ZNF598Q86UK7 904 aaKnown RBP16.05■□□□□ 0.16
USP39-206ENST00000448971 FBXL6Q8N531 539 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 ASIC4Q96FT7 647 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 CWH43Q9H720 699 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 KMT5AQ9NQR1 393 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 TLR9Q9NR96 1032 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 AAASQ9NRG9 546 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 RNF19AQ9NV58 838 aa16.05■□□□□ 0.16
USP39-206ENST00000448971 PPP6R2O75170 966 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 LAG3P18627 525 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
USP39-206ENST00000448971 NPTX2P47972 431 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 EFNA5P52803 228 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 PTPN5P54829 565 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 SIGLEC14Q08ET2 396 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 MAPK7Q13164 816 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 PRPF4BQ13523 1007 aaKnown RBP16.04■□□□□ 0.16
USP39-206ENST00000448971 UBXN11Q5T124 520 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 SLC27A1Q6PCB7 646 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 GLB1LQ6UWU2 654 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 CDR2LQ86X02 465 aaPredicted RBP16.04■□□□□ 0.16
USP39-206ENST00000448971 HACE1Q8IYU2 909 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 DAW1Q8N136 415 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 COLGALT1Q8NBJ5 622 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 KCNG4Q8TDN1 519 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 CASD1Q96PB1 797 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
USP39-206ENST00000448971 PRRX2Q99811 253 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 APOL6Q9BWW8 343 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 EIF2AQ9BY44 585 aaKnown RBP16.04■□□□□ 0.16
USP39-206ENST00000448971 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 RSAD1Q9HA92 442 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 BLOC1S4Q9NUP1 217 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 STK17AQ9UEE5 414 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 IPPQ9Y573 584 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 MYO15AQ9UKN7 3530 aa16.04■□□□□ 0.16
USP39-206ENST00000448971 SPTBN4Q9H254 2564 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 NPHP3-ACAD11A0A0J9YXS1 232 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 N4BP3O15049 544 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 TBCAO75347 108 aaKnown RBP16.03■□□□□ 0.16
USP39-206ENST00000448971 FAM13AO94988 1023 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 NPTXRO95502 500 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 BRD1O95696 1058 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 ITGA4P13612 1032 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 STAT6P42226 847 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
USP39-206ENST00000448971 FAM187BQ17R55 369 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 RRAGBQ5VZM2 374 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
USP39-206ENST00000448971 THNSL1Q8IYQ7 743 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 URGCPQ8TCY9 931 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 REEP2Q9BRK0 252 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 ADPGKQ9BRR6 497 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 FZD8Q9H461 694 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 C17orf75Q9HAS0 396 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 CFAP45Q9UL16 551 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 ODF2LQ9ULJ1 636 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
USP39-206ENST00000448971 KMT2EQ8IZD2 1858 aa16.03■□□□□ 0.16
USP39-206ENST00000448971 SFI1A8K8P3 1242 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 SLC16A4O15374 487 aa16.02■□□□□ 0.16
USP39-206ENST00000448971 ZNF623O75123 536 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms