RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ARMCX6Q7L4S7 300 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 RD3Q7Z3Z2 195 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TRIM50Q86XT4 487 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SRBD1Q8N5C6 995 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 COPS5Q92905 334 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 CHMP6Q96FZ7 201 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 LSG1Q9H089 658 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 BTBD7Q9P203 1132 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLC16A4O15374 487 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 MBL2P11226 248 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PLCB3Q01970 1234 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAPRE1Q15691 268 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 CELF3Q5SZQ8 465 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 Q7L0L9 218 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 NT5C1BQ96P26 610 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 CELF4Q9BZC1 486 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 INTS2Q9H0H0 1204 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZSWIM6Q9HCJ5 1215 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 UBQLN1Q9UMX0 589 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 TNFRSF10AO00220 468 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 RHOBTB1O94844 696 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 VTNP04004 478 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 SGCGQ13326 291 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 TDRD10Q5VZ19 366 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ADGRA1Q86SQ6 560 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 SGMS1Q86VZ5 419 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 CSGALNACT2Q8N6G5 542 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ASIC4Q96FT7 647 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 CTAGE1Q96RT6 745 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 SPON2Q9BUD6 331 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ANKEF1Q9NU02 776 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 SYPP08247 313 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 MYBL2P10244 700 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 NFE2Q16621 373 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 C6orf163Q5TEZ5 329 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PPM1KQ8N3J5 372 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZNF653Q96CK0 615 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PPME1Q9Y570 386 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 E7EVH7 732 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ADCY6O43306 1168 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 GNA14O95837 355 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 F13A1P00488 732 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 UBA1P22314 1058 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 DDIT3P35638 169 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PTPN5P54829 565 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PDE1BQ01064 536 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 CNKSR3Q6P9H4 555 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 EIF2AK1Q9BQI3 630 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 LY9Q9HBG7 655 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 GSTTP1A0A1W2PQM5 241 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 SOWAHBA6NEL2 793 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 A8MXQ7 604 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PFDN6O15212 129 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 FNDC3BQ53EP0 1204 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ATF7IP2Q5U623 682 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 LRRC31Q6UY01 552 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PALM2Q8IXS6 379 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 DBF4BQ8NFT6 615 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM81BQ96LP2 452 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 TRPV6Q9H1D0 765 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 SENP2Q9HC62 589 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 TUFT1Q9NNX1 390 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 IL23AQ9NPF7 189 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAN1C1Q9NR34 630 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ELOVL2Q9NXB9 296 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ODC1P11926 461 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 GJA8P48165 433 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 KCNH2Q12809 1159 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 LRMPQ12912 555 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 GIT2Q14161 759 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 IFI16Q16666 785 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 PHKG1Q16816 387 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 TTC31Q49AM3 519 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZNF410Q86VK4 478 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 GPIHBP1Q8IV16 184 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 MB21D2Q8IYB1 491 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 RNF214Q8ND24 703 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 TSTD1Q8NFU3 115 aa6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 HEXIM2Q96MH2 286 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMCO5BA8MYB1 307 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 MMP1P03956 469 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 VIMP08670 466 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TNFAIP3P21580 790 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 BRD2P25440 801 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 AXLP30530 894 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 STX17P56962 302 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 NR5A1Q13285 461 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SIRT2Q8IXJ6 389 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TRIB2Q92519 343 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 INTS4Q96HW7 963 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TRIM62Q9BVG3 475 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCIF1Q9H4Z3 704 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 ANAPC5Q9UJX4 755 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 A0A1W2PQ45 241 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 A0A1W2PQY0 241 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 TDP2O95551 362 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 APOEP02649 317 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 SPATA31D3P0C874 917 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 PRPHP41219 470 aa6.04□□□□□ -1.44
CDC42BPA-209ENST00000448940 THOP1P52888 689 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms