RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 TRIM6Q9C030 488 aaPredicted RBP27.59■■■□□ 2.01
HTATSF1-203ENST00000448450 CCDC113Q9H0I3 377 aa27.59■■■□□ 2.01
HTATSF1-203ENST00000448450 RNF39Q9H2S5 420 aa27.59■■■□□ 2.01
HTATSF1-203ENST00000448450 HES2Q9Y543 173 aa27.59■■■□□ 2.01
HTATSF1-203ENST00000448450 A0A1B0GUA9 196 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 TMEM221A6NGB7 291 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 M0R296 226 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 SPTLC2O15270 562 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 ITGA4P13612 1032 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 NCLP19338 710 aaKnown RBP27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 PBX3P40426 434 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 EFNA5P52803 228 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 DMP1Q13316 513 aaPredicted RBP27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 FAM187BQ17R55 369 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 NOMO2Q5JPE7 1267 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 PBXIP1Q96AQ6 731 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 PRIMPOLQ96LW4 560 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 TIPINQ9BVW5 301 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 PHF7Q9BWX1 381 aaPredicted RBP27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 PANK2Q9BZ23 570 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 KMT5AQ9NQR1 393 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 CCDC39Q9UFE4 941 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 ZDBF2Q9HCK1 2354 aa27.58■■■□□ 2.01
HTATSF1-203ENST00000448450 K7ERI5 159 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 ACKR2O00590 384 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 EDN1P05305 212 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 LAG3P18627 525 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 CBX2Q14781 532 aaPredicted RBP27.57■■■□□ 2
HTATSF1-203ENST00000448450 SLC27A1Q6PCB7 646 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 SUGP1Q8IWZ8 645 aaKnown RBP27.57■■■□□ 2
HTATSF1-203ENST00000448450 THNSL1Q8IYQ7 743 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 CNNM3Q8NE01 707 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 CDCA3Q99618 268 aaPredicted RBP27.57■■■□□ 2
HTATSF1-203ENST00000448450 MRPL9Q9BYD2 267 aaKnown RBP27.57■■■□□ 2
HTATSF1-203ENST00000448450 RSAD1Q9HA92 442 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 MORC2Q9Y6X9 1032 aaPredicted RBP27.57■■■□□ 2
HTATSF1-203ENST00000448450 MYH11P35749 1972 aa27.57■■■□□ 2
HTATSF1-203ENST00000448450 SLC16A4O15374 487 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 FGF18O76093 207 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 TXLNAP40222 546 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 AFF1P51825 1210 aaKnown RBP27.56■■■□□ 2
HTATSF1-203ENST00000448450 ZXDAP98168 799 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 BECN1Q14457 450 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 RRAGBQ5VZM2 374 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 PDE12Q6L8Q7 609 aaKnown RBP27.56■■■□□ 2
HTATSF1-203ENST00000448450 KCNT2Q6UVM3 1135 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 GBP3Q9H0R5 595 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 NXF3Q9H4D5 531 aaKnown RBP27.56■■■□□ 2
HTATSF1-203ENST00000448450 TBC1D13Q9NVG8 400 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 KCND2Q9NZV8 630 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 CNTNAP2Q9UHC6 1331 aa27.56■■■□□ 2
HTATSF1-203ENST00000448450 PER2O15055 1255 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 KRT18P05783 430 aaKnown RBP27.55■■■□□ 2
HTATSF1-203ENST00000448450 SRGAP2BP0DMP2 458 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 DDIT3P35638 169 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 RNASELQ05823 741 aaKnown RBP27.55■■■□□ 2
HTATSF1-203ENST00000448450 NT5DC1Q5TFE4 455 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 URGCPQ8TCY9 931 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 LARP4BQ92615 738 aaKnown RBP27.55■■■□□ 2
HTATSF1-203ENST00000448450 RPGRIP1Q96KN7 1286 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 ZNF558Q96NG5 402 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 PRRX2Q99811 253 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 PDZD7Q9H5P4 517 aa27.55■■■□□ 2
HTATSF1-203ENST00000448450 N4BP3O15049 544 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 YEATS4O95619 227 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 POMCP01189 267 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 PLS3P13797 630 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 AKAP5P24588 427 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 DUSP6Q16828 381 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 EEF1DP3Q658K8 133 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 REEP2Q9BRK0 252 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 C17orf75Q9HAS0 396 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 ZDHHC9Q9Y397 364 aa27.54■■■□□ 2
HTATSF1-203ENST00000448450 NT5C1B-RDH14C9J2C7 533 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 ZC3H11AO75152 810 aaKnown RBP eCLIP27.53■■■□□ 2
HTATSF1-203ENST00000448450 PPP6R2O75170 966 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 PTPN5P54829 565 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 DNM1Q05193 864 aaKnown RBP27.53■■■□□ 2
HTATSF1-203ENST00000448450 HACE1Q8IYU2 909 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 GAD1Q99259 594 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 ZHX3Q9H4I2 956 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 NRDE2Q9H7Z3 1164 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 UBN1Q9NPG3 1134 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 ARHGAP28Q9P2N2 729 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 PARP2Q9UGN5 583 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 RBM19Q9Y4C8 960 aaKnown RBP27.53■■■□□ 2
HTATSF1-203ENST00000448450 KMT2EQ8IZD2 1858 aa27.53■■■□□ 2
HTATSF1-203ENST00000448450 BRD1O95696 1058 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 BCAR1P56945 870 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 ERVFC1P60507 584 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 RBM10P98175 930 aaKnown RBP27.52■■■□□ 2
HTATSF1-203ENST00000448450 GIT2Q14161 759 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 ATF7IP2Q5U623 682 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 TAS1R3Q7RTX0 852 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 ZNF280BQ86YH2 543 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 PRSS33Q8NF86 280 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 VN1R2Q8NFZ6 395 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 SPIRE2Q8WWL2 714 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 TMEM134Q9H6X4 195 aa27.52■■■□□ 2
HTATSF1-203ENST00000448450 SPG21Q9NZD8 308 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms