RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NPEPPSP55786 919 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 RNF25Q96BH1 459 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 HDAC11Q96DB2 347 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 C9orf72Q96LT7 481 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 ATP6V1G1O75348 118 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 CTSWP56202 376 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 KRT17Q04695 432 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 KRT28Q7Z3Y7 464 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 REXO2Q9Y3B8 237 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 NEU2Q9Y3R4 380 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 H3BRJ5 948 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 RPL5P46777 297 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 DNAJC24Q6P3W2 148 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 LVRNQ6Q4G3 990 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 CAPN6Q9Y6Q1 641 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 PCCAP05165 728 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 TNNI1P19237 187 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 ZNF746Q6NUN9 644 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 DDX28Q9NUL7 540 aaKnown RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 AOC3Q16853 763 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 NAALADL2Q58DX5 795 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 MAPKAPK5Q8IW41 473 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 KLHL33A6NCF5 533 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 MLH1P40692 756 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 STX1BP61266 288 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 TTI2Q6NXR4 508 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 PFASO15067 1338 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 MTFR1Q15390 333 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 FAM96AQ9H5X1 160 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 CYP4F11Q9HBI6 524 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 UBAP1Q9NZ09 502 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 POTEFA5A3E0 1075 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMG1-202ENST00000446231 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 PPP1R2P3Q6NXS1 205 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 SGMS1Q86VZ5 419 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 CNKSR1Q969H4 720 aa8.34□□□□□ -1.07
SMG1-202ENST00000446231 ARIH1Q9Y4X5 557 aaPredicted RBP8.34□□□□□ -1.07
SMG1-202ENST00000446231 PRAMEF22A3QJZ6 481 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 GOLGA8RI6L899 631 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 KCNJ1P48048 391 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 GALCP54803 685 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 HIC1Q14526 733 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 MEA1Q16626 185 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 LRMDAQ9H2I8 198 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 GALNT8Q9NY28 637 aa8.34□□□□□ -1.08
SMG1-202ENST00000446231 TRPC5Q9UL62 973 aaPredicted RBP8.34□□□□□ -1.08
SMG1-202ENST00000446231 DDX3XO00571 662 aaKnown RBP eCLIP8.33□□□□□ -1.082e-15■■□□□ 12.3
SMG1-202ENST00000446231 MIS18BP1Q6P0N0 1132 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ZBED8Q8IZ13 594 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ZNF507Q8TCN5 953 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 INPP5DQ92835 1189 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 PARVGQ9HBI0 331 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ATAD3AQ9NVI7 634 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 NMT2O60551 498 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 PSMA2P25787 234 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 SCNN1BP51168 640 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 CYB5RLQ6IPT4 315 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 SYCP2Q9BX26 1530 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 PNMA6FA0A0J9YX94 578 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 TPD52L2O43399 206 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 PDE8BO95263 885 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 KRT16P08779 473 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 QPCTQ16769 361 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 RNF43Q68DV7 783 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 NMRK1Q9NWW6 199 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ZNF564Q8TBZ8 553 aaPredicted RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 PACSIN1Q9BY11 444 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 KRT82Q9NSB4 513 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 TTC7AQ9ULT0 858 aaPredicted RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 ATP10DQ9P241 1426 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 CNGA2Q16280 664 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 PPP1R15BQ5SWA1 713 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 PCGF5Q86SE9 256 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 HERC5Q9UII4 1024 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 SMIM31A0A1B0GVY4 71 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 AGPSO00116 658 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 RARGP13631 454 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 TMCO5AQ8N6Q1 288 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 POLR2BP30876 1174 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 MCAMP43121 646 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 ECSITQ9BQ95 431 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 MAP3K15Q6ZN16 1313 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 KRT36O76013 467 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ECE1P42892 770 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 TTC8Q8TAM2 541 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 RPL26L1Q9UNX3 145 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 PRAMEP78395 509 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 BASP1P80723 227 aaKnown RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 MORF4L2Q15014 288 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 ZNF662Q6ZS27 426 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 TIMMDC1Q9NPL8 285 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 F8W031 263 aaPredicted RBP8.33□□□□□ -1.08
SMG1-202ENST00000446231 RHOBTB3O94955 611 aa8.33□□□□□ -1.08
SMG1-202ENST00000446231 HSPA4LO95757 839 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms