RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CCNE1P24864 410 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 AMPD2Q01433 879 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 CCDC158Q5M9N0 1113 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 ARHGAP40Q5TG30 622 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 C12orf60Q5U649 245 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 ZNF598Q86UK7 904 aaKnown RBP7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 KLHDC4Q8TBB5 520 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 KCNE4Q8WWG9 221 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 PRIMPOLQ96LW4 560 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 ADAM2Q99965 735 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 ZBED9Q6R2W3 1325 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 DNHD1Q96M86 4753 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 TRDMT1O14717 391 aaKnown RBP7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 CTHP32929 405 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 CCDC173Q0VFZ6 552 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 ECHDC2Q86YB7 292 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 DDRGK1Q96HY6 314 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 P2RY13Q9BPV8 354 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 PLA2G2FQ9BZM2 168 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 RNF39Q9H2S5 420 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 DCP1AQ9NPI6 582 aaPredicted RBP7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 SETD4Q9NVD3 440 aa7.44□□□□□ -1.22
BRAFP1-201ENST00000445336 EXTL3O43909 919 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 GALTP07902 379 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 DRD1P21728 446 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 DHPSP49366 369 aaPredicted RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 GLUD2P49448 558 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 HDAC4P56524 1084 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 TMEM196Q5HYL7 178 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 ZNF787Q6DD87 383 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 SRRM1Q8IYB3 904 aaKnown RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 GRAMD1AQ96CP6 724 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 FAM20AQ96MK3 541 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 SLC25A18Q9H1K4 315 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 TJP2Q9UDY2 1190 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 TPCN1Q9ULQ1 816 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 ENTPD4Q9Y227 616 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 MRVI1Q9Y6F6 885 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 AK5Q9Y6K8 562 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 PTPRDP23468 1912 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 MYO5AQ9Y4I1 1855 aaKnown RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 MAGEB6P1A0A0J9YX57 407 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 P2RY2P41231 377 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 SPIRE1Q08AE8 756 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 FCHO2Q0JRZ9 810 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 ARL13BQ3SXY8 428 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 WDR44Q5JSH3 913 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 GALNT11Q8NCW6 608 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 TUBE1Q9UJT0 475 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 PTPRCP08575 1304 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 ASPMQ8IZT6 3477 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 PLK4O00444 970 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 TTLL1O95922 423 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 SLC4A3P48751 1232 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 PTH1RQ03431 593 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 MORC3Q14149 939 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 SMTNL2Q2TAL5 461 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 ARHGAP29Q52LW3 1261 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 SLFN13Q68D06 897 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 Q6ZS52 159 aa7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 HEXIM2Q96MH2 286 aaKnown RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 RTN4Q9NQC3 1192 aaKnown RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 DNMT3BQ9UBC3 853 aaKnown RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 DAXXQ9UER7 740 aaPredicted RBP7.43□□□□□ -1.22
BRAFP1-201ENST00000445336 F6X3S4 739 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 TEX28O15482 410 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 GAS2O43903 313 aaKnown RBP7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 CA8P35219 290 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 PTGER4P35408 488 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 NEDD9Q14511 834 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 HAUS6Q7Z4H7 955 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 LPIN3Q9BQK8 851 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 VN1R3Q9BXE9 311 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 MAFFQ9ULX9 164 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 AP5Z1O43299 807 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 BRINP1O60477 761 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 MGEA5O60502 916 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 ALDH1A2O94788 518 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 TIMM10P62072 90 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 SLC30A10Q6XR72 485 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 MCF2L2Q86YR7 1114 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 DCAF4Q8WV16 495 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 CENPTQ96BT3 561 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 NUP88Q99567 741 aaPredicted RBP7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 KANSL3Q9P2N6 904 aa7.42□□□□□ -1.22
BRAFP1-201ENST00000445336 CEP192Q8TEP8 1941 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 TMEM232C9JQI7 657 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 VAMP4O75379 141 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 METAP2P50579 478 aaKnown RBP eCLIP7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 GRSF1Q12849 480 aaKnown RBP eCLIP7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 TTF1Q15361 905 aaPredicted RBP7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 SBK1Q52WX2 424 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 TANGO2Q6ICL3 276 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 METTL7BQ6UX53 244 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 PNPLA1Q8N8W4 532 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 FEZF2Q8TBJ5 459 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms