RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 MYBL1P10243 752 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 SH2D3CQ8N5H7 860 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 RBM46Q8TBY0 533 aaKnown RBP23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 TAAR1Q96RJ0 339 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 GGA3Q9NZ52 723 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 TLK1Q9UKI8 766 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 PI4K2BG5E9Z4 385 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 ZNF449Q6P9G9 518 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 CPA5Q8WXQ8 436 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 SEMA6BQ9H3T3 888 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 KRT37O76014 449 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 BRAFP15056 766 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 GMPSP49915 693 aaPredicted RBP23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 BEST2Q8NFU1 509 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 RNF139Q8WU17 664 aa23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.86■■□□□ 1.41
CTDSPL-206ENST00000443503 KRT14P02533 472 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 SPARCL1Q14515 664 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 SEPT1Q8WYJ6 367 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 CENPPQ6IPU0 288 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 TTC17Q96AE7 1141 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 LACRTQ9GZZ8 138 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 AGPAT3Q9NRZ7 376 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 BZW1Q7L1Q6 419 aaKnown RBP23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 NUF2Q9BZD4 464 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 IL1R1P14778 569 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 MAP3K21Q5TCX8 1036 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 C4orf50Q6ZRC1 276 aa23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 IPO11Q9UI26 975 aaKnown RBP23.85■■□□□ 1.41
CTDSPL-206ENST00000443503 NOL3O60936 208 aaKnown RBP23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 BBS5Q8N3I7 341 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 DNAJC7Q99615 494 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 ACTR5Q9H9F9 607 aaPredicted RBP23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 PARVAQ9NVD7 372 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 EHD2Q9NZN4 543 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 ARL13BQ3SXY8 428 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 BEND6Q5SZJ8 279 aaPredicted RBP23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 IZUMO3Q5VZ72 239 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 C2orf69Q8N8R5 385 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 KIFC3Q9BVG8 833 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 UVRAGQ9P2Y5 699 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 GMNCA6NCL1 334 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 POLRMTO00411 1230 aaKnown RBP23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 KRT17Q04695 432 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 KIAA1755Q5JYT7 1200 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 MOV10L1Q9BXT6 1211 aaKnown RBP23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 KLHL11Q9NVR0 708 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 INPP5FQ9Y2H2 1132 aa23.84■■□□□ 1.41
CTDSPL-206ENST00000443503 BCAR1P56945 870 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 NCOA4Q13772 614 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 EMC2Q15006 297 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 TBC1D1Q86TI0 1168 aaPredicted RBP23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 DEPDC1BQ8WUY9 529 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 SUCLA2Q9P2R7 463 aaPredicted RBP23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 CHORDC1Q9UHD1 332 aaPredicted RBP23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 SLC4A1P02730 911 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 CASP4P49662 377 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 PDCD7Q8N8D1 485 aaKnown RBP23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 KIF12Q96FN5 646 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 FNDC3AQ9Y2H6 1198 aaKnown RBP23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 CARSP49589 748 aaKnown RBP23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 AP3M2P53677 418 aa23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 MKRN4PQ13434 485 aaPredicted RBP23.83■■□□□ 1.41
CTDSPL-206ENST00000443503 A0A087X0B3 334 aa23.83■■□□□ 1.4
CTDSPL-206ENST00000443503 FGFR4P22455 802 aa23.83■■□□□ 1.4
CTDSPL-206ENST00000443503 SREBF1P36956 1147 aa23.83■■□□□ 1.4
CTDSPL-206ENST00000443503 CAP2P40123 477 aa23.83■■□□□ 1.4
CTDSPL-206ENST00000443503 GUCY1A3Q02108 690 aa23.83■■□□□ 1.4
CTDSPL-206ENST00000443503 UNC45AQ9H3U1 944 aa23.83■■□□□ 1.4
CTDSPL-206ENST00000443503 KIAA0391O15091 583 aaKnown RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 PMS1P54277 932 aaKnown RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 SEPT6Q14141 434 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 LRRC14Q15048 493 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 SLC15A2Q16348 729 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 EPC2Q52LR7 807 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 RWDD4Q6NW29 188 aaKnown RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 KCTD17Q8N5Z5 321 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 ALG6Q9Y672 507 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 ARHGEF37A1IGU5 675 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 ATMINO43313 823 aaPredicted RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 PDIA2Q13087 525 aaKnown RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 HDAC11Q96DB2 347 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 SNF8Q96H20 258 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 NCAPGQ9BPX3 1015 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 KLHL8Q9P2G9 620 aaPredicted RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 SLC12A6Q9UHW9 1150 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 ARP10275 920 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 EPM2AIP1Q7L775 607 aaPredicted RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 ZBED8Q8IZ13 594 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 NAGPAQ9UK23 515 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 A8MXQ7 604 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 RAD51CO43502 376 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 CDH6P55285 790 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 KIAA1841Q6NSI8 718 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 MOXD1Q6UVY6 613 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 DDX42Q86XP3 938 aaKnown RBP eCLIP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 MAML1Q92585 1016 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 SYN2Q92777 582 aaPredicted RBP23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 PI4K2AQ9BTU6 479 aa23.82■■□□□ 1.4
CTDSPL-206ENST00000443503 CPSF3Q9UKF6 684 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms