RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 HGSO14964 777 aaPredicted RBP11.36□□□□□ -0.59
CALD1-210ENST00000443197 TLR3O15455 904 aaKnown RBP11.36□□□□□ -0.59
CALD1-210ENST00000443197 RNF8O76064 485 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 KIF4AO95239 1232 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 COPB2P35606 906 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 SPOPLQ6IQ16 392 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
CALD1-210ENST00000443197 THAP2Q9H0W7 228 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 SMARCAD1Q9H4L7 1026 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 OSGEPQ9NPF4 335 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 MAP3K20Q9NYL2 800 aaKnown RBP11.36□□□□□ -0.59
CALD1-210ENST00000443197 UBIAD1Q9Y5Z9 338 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 ASTN1O14525 1302 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 LRRD1A4D1F6 860 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 NKRFO15226 690 aaKnown RBP eCLIP11.36□□□□□ -0.59
CALD1-210ENST00000443197 SGPL1O95470 568 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 PBX1P40424 430 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 IRX5P78411 483 aaPredicted RBP11.36□□□□□ -0.59
CALD1-210ENST00000443197 NCOA4Q13772 614 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 DUOXA2Q1HG44 320 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 ERICH1Q86X53 443 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 EXOC8Q8IYI6 725 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 SLC20A1Q8WUM9 679 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 RNF34Q969K3 372 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 TIPINQ9BVW5 301 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 KCTD10Q9H3F6 313 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
CALD1-210ENST00000443197 RNF40O75150 1001 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 ALDH5A1P51649 535 aaPredicted RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 EPHB4P54760 987 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 DHX9Q08211 1270 aaKnown RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 PPFIA1Q13136 1202 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 OR6J1Q8NGC5 347 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 KAT5Q92993 513 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 LENG9Q96B70 501 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 PNKPQ96T60 521 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 CALN1Q9BXU9 219 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 MORC2Q9Y6X9 1032 aaPredicted RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 ATRNL1Q5VV63 1379 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 TGFB1I1O43294 461 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 CCNE2O96020 404 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 CALCAP01258 141 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 ADCY1Q08828 1119 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 OR6B2Q6IFH4 312 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 OR6B3Q8NGW1 331 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 MED10Q9BTT4 135 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 ZWILCHQ9H900 591 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 CALCOCO1Q9P1Z2 691 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 NOC2LQ9Y3T9 749 aaKnown RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 NUB1Q9Y5A7 615 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 SCP2P22307 547 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 ARHGAP25P42331 645 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 DR1Q01658 176 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 CPLX4Q7Z7G2 160 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 KCTD17Q8N5Z5 321 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 KLHL11Q9NVR0 708 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 MYH7P12883 1935 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 BUB1BO60566 1050 aaPredicted RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 ABCD1P33897 745 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 SLCO1A2P46721 670 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 RWDD2BP57060 319 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 ORC1Q13415 861 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 BSPRYQ5W0U4 402 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 DENND2CQ68D51 928 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 APTXQ7Z2E3 356 aaKnown RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 RIN2Q8WYP3 895 aaPredicted RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 TATDN2Q93075 761 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 TMEM8AQ9HCN3 771 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 MRPL47Q9HD33 250 aaKnown RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 WRAP73Q9P2S5 460 aaPredicted RBP11.35□□□□□ -0.59
CALD1-210ENST00000443197 CPA4Q9UI42 421 aa11.35□□□□□ -0.59
CALD1-210ENST00000443197 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 ABCA3Q99758 1704 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 DAPK3O43293 454 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 HSD17B4P51659 736 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 EFNA5P52803 228 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 GABPB1Q06547 395 aaPredicted RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 ANO5Q75V66 913 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 CCDC89Q8N998 374 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 MGARPQ8TDB4 240 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 SYT17Q9BSW7 474 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 PPANQ9NQ55 473 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 F8VZ95 297 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 NDUFAB1O14561 156 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 TNPO2O14787 897 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 PPP3CAQ08209 521 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 TWF2Q6IBS0 349 aaKnown RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 ARFGAP2Q8N6H7 521 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 RDM1Q8NG50 284 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 TMEM117Q9H0C3 514 aa11.34□□□□□ -0.59
CALD1-210ENST00000443197 RGS17Q9UGC6 210 aaPredicted RBP11.34□□□□□ -0.59
CALD1-210ENST00000443197 PCSK1NQ9UHG2 260 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms