RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 TCHHQ07283 1943 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 HNRNPDLO14979 420 aaKnown RBP13.51□□□□□ -0.25
USP1-203ENST00000442679 CLDN3O15551 220 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 TOM1L1O75674 476 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 MYL1P05976 194 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 MYBP10242 640 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 MCF2P10911 925 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 PROZP22891 400 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 AKAP5P24588 427 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
USP1-203ENST00000442679 LIG4P49917 911 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 ALCAMQ13740 583 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 SPOUT1Q5T280 376 aaKnown RBP13.51□□□□□ -0.25
USP1-203ENST00000442679 MPZL3Q6UWV2 235 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 LRRC55Q6ZSA7 311 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 MAP4K3Q8IVH8 894 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 TMEM192Q8IY95 271 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
USP1-203ENST00000442679 HVCN1Q96D96 273 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 SAMD11Q96NU1 681 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 ACCSQ96QU6 501 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 CDT1Q9H211 546 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 SNTG2Q9NY99 539 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 ANKFY1Q9P2R3 1169 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 GIT1Q9Y2X7 761 aa13.51□□□□□ -0.25
USP1-203ENST00000442679 ARL5CA6NH57 179 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 ABLIM1O14639 778 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 KLRC4O43908 158 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 NR1I2O75469 434 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 PPP1R37O75864 691 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 PIGRP01833 764 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
USP1-203ENST00000442679 CTNNB1P35222 781 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 BMPR1AP36894 532 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 AFF1P51825 1210 aaKnown RBP13.5□□□□□ -0.25
USP1-203ENST00000442679 CASP5P51878 434 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 UBE2HP62256 183 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 RNASELQ05823 741 aaKnown RBP13.5□□□□□ -0.25
USP1-203ENST00000442679 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 FAM26FQ5R3K3 315 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 L1TD1Q5T7N2 865 aaKnown RBP13.5□□□□□ -0.25
USP1-203ENST00000442679 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 STXBP4Q6ZWJ1 553 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 URGCPQ8TCY9 931 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 MRPL9Q9BYD2 267 aaKnown RBP13.5□□□□□ -0.25
USP1-203ENST00000442679 PRDM12Q9H4Q4 367 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 CWH43Q9H720 699 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 KLK14Q9P0G3 267 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 HCSTQ9UBK5 93 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 EXOC7Q9UPT5 735 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 GDAQ9Y2T3 454 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 RWDD3Q9Y3V2 267 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 COL4A6Q14031 1691 aa13.5□□□□□ -0.25
USP1-203ENST00000442679 EPOPA6NHQ4 379 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 RFXAPO00287 272 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 PRPF6O94906 941 aaKnown RBP13.49□□□□□ -0.25
USP1-203ENST00000442679 RPN1P04843 607 aaKnown RBP13.49□□□□□ -0.25
USP1-203ENST00000442679 LINC00271P0C7V0 271 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 MLH1P40692 756 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 GRM5P41594 1212 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 MCL1Q07820 350 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 EHHADHQ08426 723 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 KCNA1Q09470 495 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 DPYDQ12882 1025 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP1-203ENST00000442679 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 SLC39A4Q6P5W5 647 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 THNSL1Q8IYQ7 743 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 SYCP3Q8IZU3 236 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 GLIS3Q8NEA6 775 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 FBXO22Q8NEZ5 403 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 ZFP42Q96MM3 310 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 TIGD1Q96MW7 591 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 GAD1Q99259 594 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 CDX2Q99626 313 aaPredicted RBP13.49□□□□□ -0.25
USP1-203ENST00000442679 CCDC94Q9BW85 323 aaPredicted RBP13.49□□□□□ -0.25
USP1-203ENST00000442679 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 AAASQ9NRG9 546 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 EXOC1Q9NV70 894 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 TBC1D13Q9NVG8 400 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 KANSL3Q9P2N6 904 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 PCDHB12Q9Y5F1 795 aa13.49□□□□□ -0.25
USP1-203ENST00000442679 GBF1Q92538 1859 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 INPPL1O15357 1258 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
USP1-203ENST00000442679 RECQL4O94761 1208 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 POMCP01189 267 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 RB1P06400 928 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 OSTNP61366 133 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 PSMD2Q13200 908 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 POSTNQ15063 836 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 EPM2AIP1Q7L775 607 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms