RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 CLCN4P51793 760 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 AFF1P51825 1210 aaKnown RBP13.03□□□□□ -0.32
TTC28-203ENST00000442232 PTPN5P54829 565 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 NHLH1Q02575 133 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 CREMQ03060 361 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 GRIK3Q13003 919 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 PPP2R5AQ15172 486 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 AMHR2Q16671 573 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 TMC5Q6UXY8 1006 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 CATSPER3Q86XQ3 398 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 DEPTORQ8TB45 409 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 ADPGKQ9BRR6 497 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 GPRC5CQ9NQ84 441 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 USTQ9Y2C2 406 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 MYO10Q9HD67 2058 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 PIEZO1Q92508 2521 aa13.02□□□□□ -0.32
TTC28-203ENST00000442232 MED24O75448 989 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 SEC24BO95487 1268 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 GLUD1P00367 558 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 CNPP09543 421 aaKnown RBP13.02□□□□□ -0.33
TTC28-203ENST00000442232 SPATA31C1P0DKV0 1188 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 LIG1P18858 919 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 MUTP22033 750 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 AKAP5P24588 427 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 RPA1P27694 616 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 CCT6AP40227 531 aaKnown RBP13.02□□□□□ -0.33
TTC28-203ENST00000442232 DSC1Q08554 894 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 ST3GAL1Q11201 340 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.33
TTC28-203ENST00000442232 MAPK6Q16659 721 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 CDCA2Q69YH5 1023 aaPredicted RBP13.02□□□□□ -0.33
TTC28-203ENST00000442232 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 OTOP3Q7RTS5 596 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 APBB1IPQ7Z5R6 666 aaPredicted RBP13.02□□□□□ -0.33
TTC28-203ENST00000442232 GPR149Q86SP6 731 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 ALYREFQ86V81 257 aaKnown RBP13.02□□□□□ -0.33
TTC28-203ENST00000442232 NOSTRINQ8IVI9 506 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 FBXO18Q8NFZ0 1043 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 MAN1C1Q9NR34 630 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.33
TTC28-203ENST00000442232 MARCH5Q9NX47 278 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 ZDBF2Q9HCK1 2354 aa13.02□□□□□ -0.33
TTC28-203ENST00000442232 MTCL1Q9Y4B5 1905 aaKnown RBP13.01□□□□□ -0.33
TTC28-203ENST00000442232 A0A087WWV3 80 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 A0A1B0GUA9 196 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 TADA2AO75478 443 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 PRKCBP05771 671 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 NAMPTP43490 491 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 FAM187BQ17R55 369 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 USP41Q3LFD5 358 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 FUT10Q6P4F1 479 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 PADI6Q6TGC4 694 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 C15orf39Q6ZRI6 1047 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
TTC28-203ENST00000442232 STAMQ92783 540 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 IRF2BPLQ9H1B7 796 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 MFSD1Q9H3U5 465 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 KLK14Q9P0G3 267 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
TTC28-203ENST00000442232 LRWD1Q9UFC0 647 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
TTC28-203ENST00000442232 SF3B1O75533 1304 aaKnown RBP eCLIP13.01□□□□□ -0.33
TTC28-203ENST00000442232 CYP11B2P19099 503 aa13□□□□□ -0.33
TTC28-203ENST00000442232 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
TTC28-203ENST00000442232 DSG1Q02413 1049 aa13□□□□□ -0.33
TTC28-203ENST00000442232 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
TTC28-203ENST00000442232 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
TTC28-203ENST00000442232 KANK3Q6NY19 840 aa13□□□□□ -0.33
TTC28-203ENST00000442232 CYP26C1Q6V0L0 522 aa13□□□□□ -0.33
TTC28-203ENST00000442232 KIFAP3Q92845 792 aa13□□□□□ -0.33
TTC28-203ENST00000442232 ASIC4Q96FT7 647 aa13□□□□□ -0.33
TTC28-203ENST00000442232 PIDD1Q9HB75 910 aa13□□□□□ -0.33
TTC28-203ENST00000442232 MIOSQ9NXC5 875 aa13□□□□□ -0.33
TTC28-203ENST00000442232 TEX28O15482 410 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 ST18O60284 1047 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 LILRB3O75022 631 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 BRD1O95696 1058 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 THP07101 528 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 ASGR2P07307 311 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 MRE11P49959 708 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 EFNA5P52803 228 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 TUSC3Q13454 348 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 TAS1R1Q7RTX1 841 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 PRSS33Q8NF86 280 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 CMASQ8NFW8 434 aaPredicted RBP12.99□□□□□ -0.33
TTC28-203ENST00000442232 SNX29Q8TEQ0 813 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 RIN2Q8WYP3 895 aaPredicted RBP12.99□□□□□ -0.33
TTC28-203ENST00000442232 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 FZD8Q9H461 694 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 PDZD7Q9H5P4 517 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 RXFP1Q9HBX9 757 aa12.99□□□□□ -0.33
TTC28-203ENST00000442232 LIMD1Q9UGP4 676 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms