RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 STX10O60499 249 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 KPNA6O60684 536 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 GNRH1P01148 92 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 GJB1P08034 283 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 RARBP10826 455 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 PSEN2P49810 448 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 CACNB2Q08289 660 aaPredicted RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 ZPBP2Q6X784 338 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 LINC01465Q8N7H1 131 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 OR8K1Q8NGG5 319 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 CRACR2AQ9BSW2 395 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 TARS2Q9BW92 718 aaKnown RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 TTYH3Q9C0H2 523 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 SETD4Q9NVD3 440 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 MYH11P35749 1972 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 A0A1W2PQJ5 194 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GOLGA8IPA6NC78 632 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GOLGA8JA6NMD2 632 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 SMIM10L2AP0DMW4 78 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 SMIM10L2BP0DMW5 78 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 ELNP15502 786 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 PHKA2P46019 1235 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 VAMP7P51809 220 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GJA9P57773 515 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 PTENP60484 403 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 ZBED6P86452 979 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 KCNMA1Q12791 1236 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 TRIM32Q13049 653 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GPS2Q13227 327 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 SNRNP35Q16560 246 aaKnown RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GNASQ5JWF2 1037 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GPD1LQ8N335 351 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 ZNF513Q8N8E2 541 aaPredicted RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 LMBR1Q8WVP7 490 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 SAAL1Q96ER3 474 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 NAA15Q9BXJ9 866 aaKnown RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 MRPL4Q9BYD3 311 aaKnown RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 KIAA1586Q9HCI6 787 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 ABHD10Q9NUJ1 306 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 STYXL1Q9Y6J8 313 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GTPBP10A4D1E9 387 aaKnown RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 H0YHG0 523 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 INO80B-WBP1J3KQ70 363 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 RNF225M0QZC1 329 aaPredicted RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 HAS3O00219 553 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 ARHGAP6O43182 974 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 MSCO60682 206 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 IPO7O95373 1038 aaKnown RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 PRKCBP05771 671 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 TRIM49P0CI25 452 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 TRIM49CP0CI26 452 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 TNNT1P13805 278 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 CORO7P57737 925 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 SARNPP82979 210 aaKnown RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 EXOC3L4Q17RC7 722 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 MARCH8Q5T0T0 291 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 C1QTNF12Q5T7M4 302 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 GBP6Q6ZN66 633 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 USP37Q86T82 979 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 CBWD2Q8IUF1 395 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 RAET1EQ8TD07 263 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 ZNF668Q96K58 619 aaPredicted RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 FBXL18Q96ME1 805 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 NFKBIZQ9BYH8 718 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 EDEM3Q9BZQ6 932 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 INO80BQ9C086 356 aaPredicted RBP8.77□□□□□ -1.01
CCDC39-201ENST00000442201 CCDC113Q9H0I3 377 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 USP20Q9Y2K6 914 aa8.77□□□□□ -1.01
CCDC39-201ENST00000442201 FKTNO75072 461 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 HMGCRP04035 888 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 PNMA6AP0CW24 399 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 MATR3P43243 847 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 KCNJ6P48051 423 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 FMO5P49326 533 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 PURAQ00577 322 aaKnown RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 NFRKBQ6P4R8 1299 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 CACNA2D4Q7Z3S7 1137 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 TMEM139Q8IV31 216 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 REXO1L1PQ8IX06 675 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 LSM14BQ9BX40 385 aaKnown RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 AGPAT5Q9NUQ2 364 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 SAGE1Q9NXZ1 904 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ANKFY1Q9P2R3 1169 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 AGO2Q9UKV8 859 aaKnown RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ZNF233A6NK53 670 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ACKR2O00590 384 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 EXTL3O43909 919 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ZEB2O60315 1214 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 TOM1L1O75674 476 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
CCDC39-201ENST00000442201 PGK1P00558 417 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 VTNP04004 478 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 IVLP07476 585 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ADRB2P07550 413 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 NEFHP12036 1026 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 ZSWIM2Q8NEG5 633 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 SCLT1Q96NL6 688 aa8.76□□□□□ -1.01
CCDC39-201ENST00000442201 DNAJC7Q99615 494 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms