RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 COL9A1P20849 921 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 GUCY2CP25092 1073 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 MLH1P40692 756 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 MTHFRP42898 656 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 AFF1P51825 1210 aaKnown RBP12.3□□□□□ -0.44
NELFE-205ENST00000441998 NBR1Q14596 966 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 PTPN14Q15678 1187 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 CLUL1Q15846 466 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 ECM1Q16610 540 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 DCAF4L1Q3SXM0 396 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 LONRF3Q496Y0 759 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 ELMSAN1Q6PJG2 1045 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 RIPOR3Q96MK2 946 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.3□□□□□ -0.44
NELFE-205ENST00000441998 MRPL17Q9NRX2 175 aaKnown RBP12.3□□□□□ -0.44
NELFE-205ENST00000441998 CHST7Q9NS84 486 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 WDR81Q562E7 1941 aa12.3□□□□□ -0.44
NELFE-205ENST00000441998 LOXHD1Q8IVV2 1947 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 K7ERI5 159 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 PRKCBP05771 671 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 CREMQ03060 361 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 DMP1Q13316 513 aaPredicted RBP12.29□□□□□ -0.44
NELFE-205ENST00000441998 IL17AQ16552 155 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 ATAT1Q5SQI0 421 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 RINT1Q6NUQ1 792 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 C1orf186Q6ZWK4 172 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 BCL7CQ8WUZ0 217 aaPredicted RBP12.29□□□□□ -0.44
NELFE-205ENST00000441998 SPIRE2Q8WWL2 714 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 BSNDQ8WZ55 320 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.44
NELFE-205ENST00000441998 INTS4Q96HW7 963 aaKnown RBP12.29□□□□□ -0.44
NELFE-205ENST00000441998 RPS6KC1Q96S38 1066 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 MMTAG2Q9BU76 263 aaKnown RBP12.29□□□□□ -0.44
NELFE-205ENST00000441998 HERC2P3Q9BVR0 1158 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 VN1R3Q9BXE9 311 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 NXF3Q9H4D5 531 aaKnown RBP12.29□□□□□ -0.44
NELFE-205ENST00000441998 PDZD7Q9H5P4 517 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 RXFP1Q9HBX9 757 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 C11orf16Q9NQ32 467 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 TNFSF13BQ9Y275 285 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 USTQ9Y2C2 406 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 NR2E1Q9Y466 385 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 HES2Q9Y543 173 aa12.29□□□□□ -0.44
NELFE-205ENST00000441998 H0YCG3 227 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 B4GALT3O60512 393 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 PAPLNO95428 1278 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 NPTXRO95502 500 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 URODP06132 367 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 PDIA4P13667 645 aaKnown RBP12.28□□□□□ -0.44
NELFE-205ENST00000441998 OR1G1P47890 313 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 NPTX2P47972 431 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 SCNN1GP51170 649 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 SMTNP53814 917 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 DSG1Q02413 1049 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 ELAVL2Q12926 359 aaKnown RBP12.28□□□□□ -0.44
NELFE-205ENST00000441998 TUSC3Q13454 348 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 USP41Q3LFD5 358 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 C15orf39Q6ZRI6 1047 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 SYT2Q8N9I0 419 aaPredicted RBP12.28□□□□□ -0.44
NELFE-205ENST00000441998 CMASQ8NFW8 434 aaPredicted RBP12.28□□□□□ -0.44
NELFE-205ENST00000441998 EDAQ92838 391 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 ZFP42Q96MM3 310 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 KLHL5Q96PQ7 755 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 KCNH6Q9H252 994 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 MIOSQ9NXC5 875 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 FNIP2Q9P278 1114 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 ARHGAP28Q9P2N2 729 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 PARP2Q9UGN5 583 aa12.28□□□□□ -0.44
NELFE-205ENST00000441998 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.28□□□□□ -0.44
NELFE-205ENST00000441998 TCF20Q9UGU0 1960 aaKnown RBP12.28□□□□□ -0.44
NELFE-205ENST00000441998 E9PMD0 336 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 BRD1O95696 1058 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 THP07101 528 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 ADH1AP07327 375 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 CNPP09543 421 aaKnown RBP12.27□□□□□ -0.45
NELFE-205ENST00000441998 AKAP5P24588 427 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 KLRC2P26717 231 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 ABCD1P33897 745 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 LONP1P36776 959 aaKnown RBP12.27□□□□□ -0.45
NELFE-205ENST00000441998 GLUD2P49448 558 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 CLCN4P51793 760 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 KIAA1841Q6NSI8 718 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 PDXDC1Q6P996 788 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 BMP8AQ7Z5Y6 402 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 CABP7Q86V35 215 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 FBXL18Q96ME1 805 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.45
NELFE-205ENST00000441998 SFXN1Q9H9B4 322 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 PTPRHQ9HD43 1115 aa12.27□□□□□ -0.45
NELFE-205ENST00000441998 TOPORSQ9NS56 1045 aaPredicted RBP12.27□□□□□ -0.45
NELFE-205ENST00000441998 ADAM28Q9UKQ2 775 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms