RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PRR36Q9H6K5 1346 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 C16orf96A6NNT2 1141 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 FOXO3O43524 673 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 AOC2O75106 756 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 CKBP12277 381 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 HMGB2P26583 209 aaKnown RBP11.35□□□□□ -0.59
SYNE2-206ENST00000441438 MRPS15P82914 257 aaKnown RBP11.35□□□□□ -0.59
SYNE2-206ENST00000441438 STXBP5Q5T5C0 1151 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 TMEM53Q6P2H8 277 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 NLRP8Q86W28 1048 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 ITPRIPQ8IWB1 547 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 SCYL3Q8IZE3 742 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 AVL9Q8NBF6 648 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 SLC4A11Q8NBS3 891 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 FBXO15Q8NCQ5 510 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-206ENST00000441438 RAPGEF5Q92565 580 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 TRIM4Q9C037 500 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 SDHAF3Q9NRP4 125 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 EXOC7Q9UPT5 735 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 BCL9LQ86UU0 1499 aa11.35□□□□□ -0.59
SYNE2-206ENST00000441438 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
SYNE2-206ENST00000441438 GOLGA6L4A6NEF3 574 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 CHURC1-FNTBB4DL54 471 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 CYP4F8P98187 520 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 PTPN21Q16825 1174 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 BCL7CQ8WUZ0 217 aaPredicted RBP11.34□□□□□ -0.59
SYNE2-206ENST00000441438 UCMAQ8WVF2 138 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 ARHGAP45Q92619 1136 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 TRIM63Q969Q1 353 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 ATP6V1G3Q96LB4 118 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 YME1L1Q96TA2 773 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 UBN1Q9NPG3 1134 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 ITM2CQ9NQX7 267 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 USP21Q9UK80 565 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 KIAA1024Q9UPX6 916 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 PDLIM1O00151 329 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 KRIT1O00522 736 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 DOK2O60496 412 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 RANBP6O60518 1105 aaKnown RBP11.34□□□□□ -0.59
SYNE2-206ENST00000441438 POU2F2P09086 479 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 MPSTP25325 297 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 DIO1P49895 249 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 GSTO1P78417 241 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 CUL4BQ13620 913 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 PM20D1Q6GTS8 502 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 ZNF565Q8N9K5 539 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 FERD3LQ96RJ6 166 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 TTC41PQ6P2S7 1318 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 A6NNZ2 444 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
SYNE2-206ENST00000441438 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
SYNE2-206ENST00000441438 FUT11Q495W5 492 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 CFAP221Q4G0U5 840 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 ELMSAN1Q6PJG2 1045 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 CNTD1Q8N815 330 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 TTC13Q8NBP0 860 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 SGK3Q96BR1 496 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 PSTPIP2Q9H939 334 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 AGO4Q9HCK5 861 aaKnown RBP11.34□□□□□ -0.59
SYNE2-206ENST00000441438 CDC23Q9UJX2 597 aa11.34□□□□□ -0.59
SYNE2-206ENST00000441438 SBF2Q86WG5 1849 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 ITGB1P05556 798 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 ADRB2P07550 413 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 HNMTP50135 292 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 CLCN4P51793 760 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 TMTC1Q8IUR5 882 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 CD302Q8IX05 232 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 SLC15A3Q8IY34 581 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 GIMAP7Q8NHV1 300 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 SLC22A8Q8TCC7 542 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 FETUBQ9UGM5 382 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 TTC21BQ7Z4L5 1316 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 M0R2C6 588 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 NVLO15381 856 aaKnown RBP11.33□□□□□ -0.6
SYNE2-206ENST00000441438 POLR2MP0CAP2 368 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 ACTN1P12814 892 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 KELP23276 732 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 CSTF2P33240 577 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYNE2-206ENST00000441438 KRT9P35527 623 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 CPT1AP50416 773 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 ZNF445P59923 1031 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 TRIM32Q13049 653 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 KLHL40Q2TBA0 621 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 PACS2Q86VP3 889 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 BTBD6Q96KE9 485 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 SPON2Q9BUD6 331 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 EMILIN2Q9BXX0 1053 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 PDE11AQ9HCR9 933 aa11.33□□□□□ -0.6
SYNE2-206ENST00000441438 TSPAN3O60637 253 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 TRIM16O95361 564 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 VAV1P15498 845 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 JAK1P23458 1154 aa11.32□□□□□ -0.6
SYNE2-206ENST00000441438 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
SYNE2-206ENST00000441438 FBXO43Q4G163 708 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms