RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 MCCD1P59942 119 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 CYP27A1Q02318 531 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 PWP2Q15269 919 aaKnown RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 CCL14Q16627 93 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 AAK1Q2M2I8 961 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 MIS18BP1Q6P0N0 1132 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 WDR93Q6P2C0 686 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 SLC39A5Q6ZMH5 540 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 FAM133AQ8N9E0 248 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 XXYLT1Q8NBI6 393 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 ATRIPQ8WXE1 791 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 FAM81BQ96LP2 452 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 ACBD3Q9H3P7 528 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 ATP6V0A4Q9HBG4 840 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
HDAC6-209ENST00000440653 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 SLC9A2Q9UBY0 812 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 APEX2Q9UBZ4 518 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 TRIM10Q9UDY6 481 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 SLC45A1Q9Y2W3 748 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 CAPN6Q9Y6Q1 641 aa9.92□□□□□ -0.82
HDAC6-209ENST00000440653 NCANO14594 1321 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 GRID2IPA4D2P6 1211 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 RCCD1A6NED2 376 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 F8VZ95 297 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 BACH1O14867 736 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 CLIC2O15247 247 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 PEX10O60683 326 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
HDAC6-209ENST00000440653 CCNE2O96020 404 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 CASP4P49662 377 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 CYP2J2P51589 502 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 GFPT1Q06210 699 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-209ENST00000440653 GABPB1Q06547 395 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-209ENST00000440653 GPS2Q13227 327 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 TMEM132BQ14DG7 1078 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 NAB2Q15742 525 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 XKR9Q5GH70 373 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 TREML2Q5T2D2 321 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 SMYD5Q6GMV2 418 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 DPY19L2P1Q6NXN4 242 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 CC2D1AQ6P1N0 951 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-209ENST00000440653 HAUS6Q7Z4H7 955 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 RIOX2Q8IUF8 465 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 GTF3C2Q8WUA4 911 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-209ENST00000440653 CRACR2AQ9BSW2 395 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 STK33Q9BYT3 514 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 INTS2Q9H0H0 1204 aaKnown RBP9.91□□□□□ -0.82
HDAC6-209ENST00000440653 SIX2Q9NPC8 291 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 PUF60Q9UHX1 559 aaKnown RBP9.91□□□□□ -0.82
HDAC6-209ENST00000440653 NENFQ9UMX5 172 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 USP20Q9Y2K6 914 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 MYH10P35580 1976 aa9.91□□□□□ -0.82
HDAC6-209ENST00000440653 SPTBN4Q9H254 2564 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 SUPT20HL2P0C7V6 817 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 PNMA6AP0CW24 399 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-209ENST00000440653 ERCC3P19447 782 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 GTF2H1P32780 548 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 SOX5P35711 763 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 PAFAH1B1P43034 410 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 MXI1P50539 228 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 PRKCEQ02156 737 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 KCNA1Q09470 495 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.82
HDAC6-209ENST00000440653 STXBP2Q15833 593 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 UGCGQ16739 394 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 ZC2HC1CQ53FD0 456 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-209ENST00000440653 XKR3Q5GH77 459 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 GJC2Q5T442 439 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-209ENST00000440653 CCDC181Q5TID7 509 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 SYCE1Q8N0S2 351 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 FAM167AQ96KS9 214 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 ANKZF1Q9H8Y5 726 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 FAM53CQ9NYF3 392 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 HSPBP1Q9NZL4 362 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 ZNF236Q9UL36 1845 aa9.9□□□□□ -0.82
HDAC6-209ENST00000440653 DCHS1Q96JQ0 3298 aa9.9□□□□□ -0.83
HDAC6-209ENST00000440653 SFI1A8K8P3 1242 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 GAS2O43903 313 aaKnown RBP9.89□□□□□ -0.83
HDAC6-209ENST00000440653 MOCS3O95396 460 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 SLC25A27O95847 323 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 ABL1P00519 1130 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 ZSCAN20P17040 1043 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-209ENST00000440653 SLC9A1P19634 815 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 GARTP22102 1010 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 EDNRBP24530 442 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 RFC5P40937 340 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 VAMP7P51809 220 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 NPEPPSP55786 919 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 ACTR2P61160 394 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 IRX3P78415 501 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-209ENST00000440653 PTK2Q05397 1052 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 CLUL1Q15846 466 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 KIAA0753Q2KHM9 967 aa9.89□□□□□ -0.83
HDAC6-209ENST00000440653 FAM102BQ5T8I3 360 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms