RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 NCBP1Q09161 790 aaKnown RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 PAK2Q13177 524 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 TPD52L1Q16890 204 aaPredicted RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 TCTN1Q2MV58 587 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 HSP90AA4PQ58FG1 418 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 RTN4RL1Q86UN2 441 aaPredicted RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 XXYLT1Q8NBI6 393 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 SAAL1Q96ER3 474 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 TCHPQ9BT92 498 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 EIF2AQ9BY44 585 aaKnown RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 CHST12Q9NRB3 414 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 PCDH10Q9P2E7 1040 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 ANKFY1Q9P2R3 1169 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 AGO2Q9UKV8 859 aaKnown RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 PIN4Q9Y237 131 aaKnown RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 LRRC10BA6NIK2 292 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 N4BP3O15049 544 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 MEFVO15553 781 aaPredicted RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 AP5Z1O43299 807 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 EXTL3O43909 919 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 EXOC3O60645 756 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 GSE1Q14687 1217 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 ZNF568Q3ZCX4 644 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 SEZ6Q53EL9 994 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 PLEKHG4Q58EX7 1191 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 NOTUMQ6P988 496 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 SLC27A1Q6PCB7 646 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 APTXQ7Z2E3 356 aaKnown RBP8.17□□□□□ -1.1
UBR3-205ENST00000439681 CBWD2Q8IUF1 395 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 TMEM192Q8IY95 271 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 TNS4Q8IZW8 715 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 RDH13Q8NBN7 331 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 FAM213AQ9BRX8 229 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 MSTO1Q9BUK6 570 aa8.17□□□□□ -1.1
UBR3-205ENST00000439681 GOLGA6L19H0YKK7 550 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 KIAA0391O15091 583 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 OGTO15294 1046 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 SLC16A3O15427 465 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 PARNO95453 639 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 NPTXRO95502 500 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 FGFR1OPO95684 399 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 ADRB2P07550 413 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 PSMC2P35998 433 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 TNFSF9P41273 254 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 ACOT2P49753 483 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 MARSP56192 900 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 MAPK8IP2Q13387 824 aaPredicted RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 NOLC1Q14978 699 aaKnown RBP eCLIP8.16□□□□□ -1.1
UBR3-205ENST00000439681 TMEM132AQ24JP5 1023 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 TCP11X2Q5H9J9 407 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 FRMD5Q7Z6J6 570 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 GPD1LQ8N335 351 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 CEP120Q8N960 986 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 DBF4BQ8NFT6 615 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 PLEKHO2Q8TD55 490 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 CCDC51Q96ER9 411 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 MFSD14AQ96MC6 490 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 MKNK1Q9BUB5 465 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 IFIH1Q9BYX4 1025 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 KIAA1586Q9HCI6 787 aa8.16□□□□□ -1.1
UBR3-205ENST00000439681 PRDM5Q9NQX1 630 aaPredicted RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 LIMA1Q9UHB6 759 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 CPSF3Q9UKF6 684 aaKnown RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 TRIP12Q14669 1992 aaPredicted RBP8.16□□□□□ -1.1
UBR3-205ENST00000439681 KCNJ18B7U540 433 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 MAPK13O15264 365 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 GNA14O95837 355 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 STAG3L1P0CL83 205 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 MATR3P43243 847 aaKnown RBP eCLIP8.15□□□□□ -1.13e-6■■■■□ 22.9
UBR3-205ENST00000439681 WNT7BP56706 349 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 FAM189BP81408 668 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 KCNJ12Q14500 433 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 SNRNP35Q16560 246 aaKnown RBP8.15□□□□□ -1.1
UBR3-205ENST00000439681 UVSSAQ2YD98 709 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 DCAF4L1Q3SXM0 396 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 C1orf220Q5T0J3 134 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 MFSD5Q6N075 450 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 TRIM59Q8IWR1 403 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 FAM186BQ8IYM0 893 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 THNSL1Q8IYQ7 743 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 SMG8Q8ND04 991 aaKnown RBP8.15□□□□□ -1.1
UBR3-205ENST00000439681 LINC01599Q8WXQ3 324 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 CNOT6LQ96LI5 555 aaKnown RBP8.15□□□□□ -1.1
UBR3-205ENST00000439681 ADAM2Q99965 735 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 RNF39Q9H2S5 420 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 RGS18Q9NS28 235 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 FRMD4BQ9Y2L6 1034 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 EVPLQ92817 2033 aa8.15□□□□□ -1.1
UBR3-205ENST00000439681 GOLGA6L3A6NEY3 463 aa8.15□□□□□ -1.11
UBR3-205ENST00000439681 ZNF233A6NK53 670 aa8.15□□□□□ -1.11
UBR3-205ENST00000439681 ENPP3O14638 875 aa8.15□□□□□ -1.11
UBR3-205ENST00000439681 LDHAP00338 332 aaKnown RBP8.15□□□□□ -1.11
UBR3-205ENST00000439681 CLTAP09496 248 aa8.15□□□□□ -1.11
UBR3-205ENST00000439681 RAG1P15918 1043 aa8.15□□□□□ -1.11
UBR3-205ENST00000439681 ZSCAN20P17040 1043 aaPredicted RBP8.15□□□□□ -1.11
UBR3-205ENST00000439681 EEF1GP26641 437 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms