RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 DCAF4L1Q3SXM0 396 aa26.43■■□□□ 1.82
CPNE1-217ENST00000439669 ARSHQ5FYA8 562 aa26.43■■□□□ 1.82
CPNE1-217ENST00000439669 KRI1Q8N9T8 703 aaKnown RBP26.43■■□□□ 1.82
CPNE1-217ENST00000439669 NGRNQ9NPE2 291 aaKnown RBP26.43■■□□□ 1.82
CPNE1-217ENST00000439669 CCDC39Q9UFE4 941 aa26.43■■□□□ 1.82
CPNE1-217ENST00000439669 TCF20Q9UGU0 1960 aaKnown RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 ZSCAN22P10073 491 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 NASPP49321 788 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 NDUFV1P49821 464 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 SMTNP53814 917 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 CTC1Q2NKJ3 1217 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 APBB1IPQ7Z5R6 666 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 EFHBQ8N7U6 833 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 BCL7CQ8WUZ0 217 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 SPIRE2Q8WWL2 714 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 LARP4BQ92615 738 aaKnown RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 UHRF1Q96T88 793 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 REEP2Q9BRK0 252 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 MRPL4Q9BYD3 311 aaKnown RBP26.42■■□□□ 1.82
CPNE1-217ENST00000439669 MIOSQ9NXC5 875 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 SNTG2Q9NY99 539 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 KCNG1Q9UIX4 513 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 ODF2LQ9ULJ1 636 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 FAN1Q9Y2M0 1017 aa26.42■■□□□ 1.82
CPNE1-217ENST00000439669 TBX10O75333 385 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 FAM13AO94988 1023 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 ALDH2P05091 517 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 OR1G1P47890 313 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 SMC1AQ14683 1233 aaKnown RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 BMS1Q14692 1282 aaKnown RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 FOXD4L6Q3SYB3 417 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 FOXD4L3Q6VB84 417 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 VPS52Q8N1B4 723 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 NECAB3Q96P71 396 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 LARSQ9P2J5 1176 aaKnown RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 TFIP11Q9UBB9 837 aaKnown RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 TNFSF13BQ9Y275 285 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 PRG3Q9Y2Y8 225 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 MORC2Q9Y6X9 1032 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-217ENST00000439669 ZMYM2Q9UBW7 1377 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 MYH15Q9Y2K3 1946 aa26.41■■□□□ 1.82
CPNE1-217ENST00000439669 MYH11P35749 1972 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 NRP1O14786 923 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 RECQL4O94761 1208 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 F13A1P00488 732 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 LTBRP36941 435 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 DLX2Q07687 328 aaPredicted RBP26.4■■□□□ 1.82
CPNE1-217ENST00000439669 GRIK3Q13003 919 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 STRN3Q13033 797 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 ADAM15Q13444 863 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 CLUL1Q15846 466 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 DUSP6Q16828 381 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 ZNF568Q3ZCX4 644 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 PTCRAQ6ISU1 281 aaPredicted RBP26.4■■□□□ 1.82
CPNE1-217ENST00000439669 TAS1R3Q7RTX0 852 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 DDX53Q86TM3 631 aaKnown RBP26.4■■□□□ 1.82
CPNE1-217ENST00000439669 COLGALT2Q8IYK4 626 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 CDCA3Q99618 268 aaPredicted RBP26.4■■□□□ 1.82
CPNE1-217ENST00000439669 TARS2Q9BW92 718 aaKnown RBP26.4■■□□□ 1.82
CPNE1-217ENST00000439669 GDAQ9Y2T3 454 aa26.4■■□□□ 1.82
CPNE1-217ENST00000439669 HIDE1A8MVS5 230 aa26.39■■□□□ 1.82
CPNE1-217ENST00000439669 DSC1Q08554 894 aa26.39■■□□□ 1.82
CPNE1-217ENST00000439669 RRAGBQ5VZM2 374 aa26.39■■□□□ 1.82
CPNE1-217ENST00000439669 LINC00301Q8NCQ3 95 aa26.39■■□□□ 1.82
CPNE1-217ENST00000439669 ACO2Q99798 780 aaKnown RBP26.39■■□□□ 1.82
CPNE1-217ENST00000439669 NTPCRQ9BSD7 190 aaKnown RBP26.39■■□□□ 1.82
CPNE1-217ENST00000439669 ZBP1Q9H171 429 aa26.39■■□□□ 1.82
CPNE1-217ENST00000439669 ZHX3Q9H4I2 956 aa26.39■■□□□ 1.82
CPNE1-217ENST00000439669 STK17AQ9UEE5 414 aa26.39■■□□□ 1.82
CPNE1-217ENST00000439669 TDRD15B5MCY1 1934 aaKnown RBP26.38■■□□□ 1.81
CPNE1-217ENST00000439669 FSD2A1L4K1 749 aa26.38■■□□□ 1.81
CPNE1-217ENST00000439669 SPTLC2O15270 562 aa26.38■■□□□ 1.81
CPNE1-217ENST00000439669 TBCAO75347 108 aaKnown RBP26.38■■□□□ 1.81
CPNE1-217ENST00000439669 NR1I2O75469 434 aa26.38■■□□□ 1.81
CPNE1-217ENST00000439669 DDIT3P35638 169 aa26.38■■□□□ 1.81
CPNE1-217ENST00000439669 PKP1Q13835 747 aa26.38■■□□□ 1.81
CPNE1-217ENST00000439669 PUS10Q3MIT2 529 aaKnown RBP26.38■■□□□ 1.81
CPNE1-217ENST00000439669 TMEM161BQ8NDZ6 487 aa26.38■■□□□ 1.81
CPNE1-217ENST00000439669 GSTCDQ8NEC7 633 aa26.38■■□□□ 1.81
CPNE1-217ENST00000439669 H0YCG3 227 aa26.37■■□□□ 1.81
CPNE1-217ENST00000439669 MAPTP10636 758 aaKnown RBP26.37■■□□□ 1.81
CPNE1-217ENST00000439669 GIT2Q14161 759 aa26.37■■□□□ 1.81
CPNE1-217ENST00000439669 MYCT1Q8N699 235 aa26.37■■□□□ 1.81
CPNE1-217ENST00000439669 MRPL43Q8N983 215 aaKnown RBP26.37■■□□□ 1.81
CPNE1-217ENST00000439669 AUTS2Q8WXX7 1259 aa26.37■■□□□ 1.81
CPNE1-217ENST00000439669 TCHPQ9BT92 498 aa26.37■■□□□ 1.81
CPNE1-217ENST00000439669 CDT1Q9H211 546 aa26.37■■□□□ 1.81
CPNE1-217ENST00000439669 PARVGQ9HBI0 331 aa26.37■■□□□ 1.81
CPNE1-217ENST00000439669 DAXXQ9UER7 740 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-217ENST00000439669 BARX2Q9UMQ3 279 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-217ENST00000439669 A0A0C4DFX4 3053 aa26.36■■□□□ 1.81
CPNE1-217ENST00000439669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-217ENST00000439669 C2orf71A6NGG8 1288 aa26.36■■□□□ 1.81
CPNE1-217ENST00000439669 YEATS4O95619 227 aa26.36■■□□□ 1.81
CPNE1-217ENST00000439669 CXCL14O95715 111 aa26.36■■□□□ 1.81
CPNE1-217ENST00000439669 GLP2RO95838 553 aa26.36■■□□□ 1.81
CPNE1-217ENST00000439669 CTSAP10619 480 aa26.36■■□□□ 1.81
CPNE1-217ENST00000439669 HARSP12081 509 aaKnown RBP26.36■■□□□ 1.81
CPNE1-217ENST00000439669 IL9P15248 144 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms