RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CFAP73A6NFT4 308 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 LGR5O75473 907 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 HSPA2P54652 639 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 YWHAGP61981 247 aaKnown RBP eCLIP6.77□□□□□ -1.33
BDNF-211ENST00000439476 TCP10Q12799 353 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 BYSLQ13895 437 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 SEC23AQ15436 765 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 CYP4F22Q6NT55 531 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PDIK1LQ8N165 341 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 AENQ8WTP8 325 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 SLC7A3Q8WY07 619 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 POMGNT1Q8WZA1 660 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ANKS1AQ92625 1134 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ANKRD36BP1Q96IX9 119 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PPCSQ9HAB8 311 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 DNAJC17Q9NVM6 304 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 DNAJC12Q9UKB3 198 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ORC6Q9Y5N6 252 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 USP17L5A8MUK1 530 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 H7C0C1 242 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PDE2AO00408 941 aaPredicted RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 TLR3O15455 904 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 MAP3K7O43318 606 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 S100BP04271 92 aaPredicted RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 HSD17B3P37058 310 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PIK3CAP42336 1068 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 HALP42357 657 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 ATP5OP48047 213 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 POLGP54098 1239 aaPredicted RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 GABPAQ06546 454 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 MMEL1Q495T6 779 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 AGBL2Q5U5Z8 902 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 THOC7Q6I9Y2 204 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 ARHGAP18Q8N392 663 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 CAVIN3Q969G5 261 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 CCDC127Q96BQ5 260 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 FAM84BQ96KN1 310 aaPredicted RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 TRIM56Q9BRZ2 755 aaKnown RBP6.77□□□□□ -1.33
BDNF-211ENST00000439476 TRIM15Q9C019 465 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 BHMT2Q9H2M3 363 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 PARVGQ9HBI0 331 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 MLXIPLQ9NP71 852 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 KBTBD4Q9NVX7 518 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 CSADQ9Y600 493 aa6.77□□□□□ -1.33
BDNF-211ENST00000439476 SIGLEC1Q9BZZ2 1709 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 PNMA6FA0A0J9YX94 578 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 POTEB3A0JP26 581 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 FAM187AA6NFU0 413 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 POTECB2RU33 542 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 RGL2O15211 777 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 KRT37O76014 449 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 NR3C1P04150 777 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 GLI1P08151 1106 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 GSTA1P08263 222 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 GSTA2P09210 222 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 POLE2P56282 527 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 HDAC4P56524 1084 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 TRIP13Q15645 432 aaPredicted RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 ABCB5Q2M3G0 1257 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-211ENST00000439476 NAALADL2Q58DX5 795 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 RCSD1Q6JBY9 416 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 POTEBQ6S5H4 581 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 SFR1Q86XK3 245 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 CPXCR1Q8N123 301 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 PDCD7Q8N8D1 485 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 XPO6Q96QU8 1125 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 KIFC3Q9BVG8 833 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 GOLPH3Q9H4A6 298 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 UBE2TQ9NPD8 197 aaPredicted RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 PALM3A6NDB9 673 aaPredicted RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 HNRNPDLO14979 420 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 BAG2O95816 211 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 FUT4P22083 530 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 MXI1P50539 228 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 AMPD2Q01433 879 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 ROR2Q01974 943 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 TFDP2Q14188 446 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 LRRC14Q15048 493 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 TMED2Q15363 201 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 KAZNQ674X7 775 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 CREG2Q8IUH2 290 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-211ENST00000439476 NSUN4Q96CB9 384 aaKnown RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 TRIM51Q9BSJ1 452 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 BATF3Q9NR55 127 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 NDE1Q9NXR1 346 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 SENP1Q9P0U3 644 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 BARX2Q9UMQ3 279 aaPredicted RBP6.76□□□□□ -1.33
BDNF-211ENST00000439476 WDR37Q9Y2I8 494 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 ATP8B3O60423 1300 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 SPATA31A3Q5VYP0 1347 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 TCRBV5S4A2TA0A5A2 114 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 CFAP69A5D8W1 941 aa6.76□□□□□ -1.33
BDNF-211ENST00000439476 SFI1A8K8P3 1242 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms