RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 GSPT2Q8IYD1 628 aaKnown RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 CMTR2Q8IYT2 770 aaKnown RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 Q8N1X5 172 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 CDYL2Q8N8U2 506 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 IL17DQ8TAD2 202 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 TSPEARQ8WU66 669 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 PITHD1Q9GZP4 211 aaPredicted RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 TUBD1Q9UJT1 453 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 PCDHB6Q9Y5E3 794 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 GPR45Q9Y5Y3 372 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 NUMBLQ9Y6R0 609 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 A0A0A6YYK5 440 aaPredicted RBP4.63□□□□□ -1.67
VPS41-207ENST00000439468 ZNF202O95125 648 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 CT47B1P0C2W7 299 aaPredicted RBP4.63□□□□□ -1.67
VPS41-207ENST00000439468 KIR2DL3P43628 341 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 FXR1P51114 621 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS41-207ENST00000439468 NPEPPSP55786 919 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 MLC1Q15049 377 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 MUM1Q2TAK8 710 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 FKBP15Q5T1M5 1219 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 NOL8Q76FK4 1167 aaKnown RBP4.63□□□□□ -1.67
VPS41-207ENST00000439468 MYO1HQ8N1T3 1032 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 MB21D1Q8N884 522 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 GAB3Q8WWW8 586 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 MIEF2Q96C03 454 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 LRGUKQ96M69 825 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 FDXACB1Q9BRP7 624 aaPredicted RBP4.63□□□□□ -1.67
VPS41-207ENST00000439468 SOX7Q9BT81 388 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 IFT122Q9HBG6 1241 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 ZNF277Q9NRM2 450 aaPredicted RBP4.63□□□□□ -1.67
VPS41-207ENST00000439468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS41-207ENST00000439468 SERPINB13Q9UIV8 391 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 REXO2Q9Y3B8 237 aaKnown RBP4.63□□□□□ -1.67
VPS41-207ENST00000439468 MRFAP1Q9Y605 127 aa4.63□□□□□ -1.67
VPS41-207ENST00000439468 CYR61O00622 381 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 NDUFS2O75306 463 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 ALDH1A2O94788 518 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 IL33O95760 270 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 HMGA2P52926 109 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 ADAM8P78325 824 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 MRPS9P82933 396 aaKnown RBP4.62□□□□□ -1.67
VPS41-207ENST00000439468 ABHD18Q0P651 414 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 RRP1BQ14684 758 aaKnown RBP4.62□□□□□ -1.67
VPS41-207ENST00000439468 MIIPQ5JXC2 388 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 SPTY2D1Q68D10 685 aaPredicted RBP4.62□□□□□ -1.67
VPS41-207ENST00000439468 LMBR1LQ6UX01 489 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 CMTM4Q8IZR5 234 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 TTC8Q8TAM2 541 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 AUTS2Q8WXX7 1259 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 PGBD4Q96DM1 585 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 HSPBAP1Q96EW2 488 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 ZNF503Q96F45 646 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 OSBPL6Q9BZF3 934 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 HAPLN2Q9GZV7 340 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 DMRT3Q9NQL9 472 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 ANLNQ9NQW6 1124 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 PARPBPQ9NWS1 579 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 AURKAIP1Q9NWT8 199 aaPredicted RBP4.62□□□□□ -1.67
VPS41-207ENST00000439468 ING3Q9NXR8 418 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 GABBR1Q9UBS5 961 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 ANKRD6Q9Y2G4 727 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 CDY2AQ9Y6F7 541 aa4.62□□□□□ -1.67
VPS41-207ENST00000439468 E2F8A0AVK6 867 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 NRP2O60462 931 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 MFAP3LO75121 409 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 RFPL1O75677 317 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 MYBP10242 640 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 GAAP10253 952 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 GNAT2P19087 354 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 MAN2A2P49641 1150 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 NRG3P56975 720 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 KIF23Q02241 960 aaPredicted RBP4.61□□□□□ -1.67
VPS41-207ENST00000439468 CD69Q07108 199 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 MGAT5Q09328 741 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 FAM102BQ5T8I3 360 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 MFSD5Q6N075 450 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 Q6ZRM9 215 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 CATIPQ7Z7H3 387 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 ELOA2Q8IYF1 753 aaPredicted RBP4.61□□□□□ -1.67
VPS41-207ENST00000439468 OR5M3Q8NGP4 307 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 ATXN2LQ8WWM7 1075 aaKnown RBP4.61□□□□□ -1.67
VPS41-207ENST00000439468 DPF2Q92785 391 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 RAX2Q96IS3 184 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 ZNF512Q96ME7 567 aaPredicted RBP4.61□□□□□ -1.67
VPS41-207ENST00000439468 MRIQ9BWK5 157 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 GPR87Q9BY21 358 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 TCF7L1Q9HCS4 588 aa4.61□□□□□ -1.67
VPS41-207ENST00000439468 HECAQ9UBI9 543 aaPredicted RBP4.61□□□□□ -1.67
VPS41-207ENST00000439468 NRP1O14786 923 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 PLSCR1O15162 318 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 IPO13O94829 963 aaKnown RBP4.6□□□□□ -1.67
VPS41-207ENST00000439468 ATF3P18847 181 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 MCM7P33993 719 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 ACVRL1P37023 503 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 SCNN1GP51170 649 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 KLF10Q13118 480 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 TUBA3CQ13748 450 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 SPIDRQ14159 915 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 TMEM240Q5SV17 173 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 TUBA3EQ6PEY2 450 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms