RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 OSBPL10Q9BXB5 764 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 SAMSN1Q9NSI8 373 aaKnown RBP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 STAP2Q9UGK3 403 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 RABGEF1Q9UJ41 708 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 KDM5BQ9UGL1 1544 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 KRT20P35900 424 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 PCNX4Q63HM2 1172 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 SZRD1Q7Z422 152 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 CCNYL1Q8N7R7 359 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 JADE3Q92613 823 aa12.17□□□□□ -0.46
PTCH1-209ENST00000437951 MLPHQ9BV36 600 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-209ENST00000437951 O00370 1275 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 TYK2P29597 1187 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 FAM45AQ8TCE6 357 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 EXT2Q93063 718 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 TNKSO95271 1327 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 GRIN2AQ12879 1464 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 PRAMEP78395 509 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 CTTNQ14247 550 aaKnown RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 KRT74Q7RTS7 529 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 TBC1D19Q8N5T2 526 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 SH3TC2Q8TF17 1288 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 HSPH1Q92598 858 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ANKRD65E5RJM6 399 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 GNPATO15228 680 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 IL2RBP14784 551 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 PDIA2Q13087 525 aaKnown RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ZFP42Q96MM3 310 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 GCNAQ96QF7 691 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 DNMT1P26358 1616 aaKnown RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 CLPTM1O96005 669 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ARMCX6Q7L4S7 300 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 FAM149B1Q96BN6 582 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 DNAJC12Q9UKB3 198 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ZNF197O14709 1029 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 GNAT1P11488 350 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ALDH1B1P30837 517 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 SNRNP27Q8WVK2 155 aaKnown RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 XPO6Q96QU8 1125 aaKnown RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 THTPAQ9BU02 230 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 HPCAL4Q9UM19 191 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 UFL1O94874 794 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ZBED8Q8IZ13 594 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 PPM1NQ8N819 430 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 FAM162AQ96A26 154 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 NPHS2Q9NP85 383 aa12.16□□□□□ -0.46
PTCH1-209ENST00000437951 ITIH2P19823 946 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 PLOD1Q02809 727 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-209ENST00000437951 HEATR6Q6AI08 1181 aaKnown RBP12.15□□□□□ -0.46
PTCH1-209ENST00000437951 C4orf22Q6V702 233 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 CALML6Q8TD86 181 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 DIS3LQ8TF46 1054 aaKnown RBP12.15□□□□□ -0.46
PTCH1-209ENST00000437951 BFARQ9NZS9 450 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 DTNAQ9Y4J8 743 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 SNPHO15079 494 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 UBTFL6P0CB48 400 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-209ENST00000437951 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 TRPC5OSA6NMA1 111 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 FKBP6O75344 327 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 OSBPP22059 807 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 MLH1P40692 756 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.46
PTCH1-209ENST00000437951 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 MAP4K1Q92918 833 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 GLMNQ92990 594 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 ARHGEF10O15013 1369 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 CYTH3O43739 400 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 FAR2Q96K12 515 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 ACAP3Q96P50 834 aa12.15□□□□□ -0.46
PTCH1-209ENST00000437951 HERC5Q9UII4 1024 aaKnown RBP12.15□□□□□ -0.46
PTCH1-209ENST00000437951 URB2Q14146 1524 aaKnown RBP12.15□□□□□ -0.46
PTCH1-209ENST00000437951 IGF2BP3O00425 579 aaKnown RBP eCLIP12.15□□□□□ -0.47
PTCH1-209ENST00000437951 MED26O95402 600 aa12.15□□□□□ -0.47
PTCH1-209ENST00000437951 TRIM25Q14258 630 aaKnown RBP12.15□□□□□ -0.47
PTCH1-209ENST00000437951 PLEKHA7Q6IQ23 1121 aa12.15□□□□□ -0.47
PTCH1-209ENST00000437951 NSMFQ6X4W1 530 aa12.15□□□□□ -0.47
PTCH1-209ENST00000437951 TMEM35BQ8NCS4 154 aa12.15□□□□□ -0.47
PTCH1-209ENST00000437951 ATL2Q8NHH9 583 aa12.15□□□□□ -0.47
PTCH1-209ENST00000437951 PDCD6IPQ8WUM4 868 aaKnown RBP12.15□□□□□ -0.47
PTCH1-209ENST00000437951 ARL8AQ96BM9 186 aa12.15□□□□□ -0.47
PTCH1-209ENST00000437951 AMNQ9BXJ7 453 aa12.15□□□□□ -0.47
PTCH1-209ENST00000437951 SPRTNQ9H040 489 aaPredicted RBP12.15□□□□□ -0.47
PTCH1-209ENST00000437951 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 KLHL41O60662 606 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 FAM200BP0CF97 657 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 COPAP53621 1224 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 ADAM22Q9P0K1 906 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 RGS20O76081 388 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 FCHO2Q0JRZ9 810 aa12.14□□□□□ -0.47
PTCH1-209ENST00000437951 OR6B2Q6IFH4 312 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms