RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ACKR2O00590 384 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 MSCO60682 206 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 C22orf31O95567 290 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 PRKCBP05771 671 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 MMP3P08254 477 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 INSRRP14616 1297 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 SMPD1P17405 629 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 MATR3P43243 847 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■■■□ 22.3
SGCE-205ENST00000437425 PHKA2P46019 1235 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 TM4SF4P48230 202 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 PTENP60484 403 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 POU5F1Q01860 360 aaKnown RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 APBA1Q02410 837 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 ARID5AQ03989 594 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 GFPT1Q06210 699 aaPredicted RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 MKRN4PQ13434 485 aaPredicted RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 NAB2Q15742 525 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 CEP112Q8N8E3 955 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 PLEKHO2Q8TD55 490 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 USP6NLQ92738 828 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 CCDC127Q96BQ5 260 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 CALR3Q96L12 384 aaKnown RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 NT5C1BQ96P26 610 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 C16orf70Q9BSU1 422 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 TARS2Q9BW92 718 aaKnown RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 IRX2Q9BZI1 471 aaPredicted RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 RNPEPQ9H4A4 650 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 UBE2TQ9NPD8 197 aaPredicted RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 PRMT7Q9NVM4 692 aaPredicted RBP16.64■□□□□ 0.25
SGCE-205ENST00000437425 RAB20Q9NX57 234 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 CDC23Q9UJX2 597 aa16.64■□□□□ 0.25
SGCE-205ENST00000437425 EVI5O60447 810 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 KIF22Q14807 665 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 KYAT1Q16773 422 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 FAM187BQ17R55 369 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 WHAMMP3Q1A5X7 153 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 PHLDB3Q6NSJ2 640 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 TSHZ1Q6ZSZ6 1077 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 RHPN2Q8IUC4 686 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 REM2Q8IYK8 340 aaPredicted RBP16.63■□□□□ 0.25
SGCE-205ENST00000437425 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 SMC1BQ8NDV3 1235 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 NOX5Q96PH1 765 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 APBA2Q99767 749 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 ACO2Q99798 780 aaKnown RBP16.63■□□□□ 0.25
SGCE-205ENST00000437425 LACRTQ9GZZ8 138 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 FZD8Q9H461 694 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 RBAKQ9NYW8 714 aaPredicted RBP16.63■□□□□ 0.25
SGCE-205ENST00000437425 ADAMTS1Q9UHI8 967 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 JRKLQ9Y4A0 524 aa16.63■□□□□ 0.25
SGCE-205ENST00000437425 A0A0U1RQJ8 604 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 A6NJR5 290 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 EFCAB8A8MWE9 144 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 KLRC1P26715 233 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 MCL1Q07820 350 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 DRP2Q13474 957 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 SV2AQ7L0J3 742 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 ZNF571Q7Z3V5 609 aaPredicted RBP16.62■□□□□ 0.25
SGCE-205ENST00000437425 ZNF710Q8N1W2 664 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 LRRC71Q8N4P6 559 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 LINC01465Q8N7H1 131 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 ATRIPQ8WXE1 791 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 TSKSQ9UJT2 592 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 NAGPAQ9UK23 515 aa16.62■□□□□ 0.25
SGCE-205ENST00000437425 A0A087X0T9 212 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 FAM155AB1AL88 458 aaPredicted RBP16.61■□□□□ 0.25
SGCE-205ENST00000437425 FANCGO15287 622 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 OGTO15294 1046 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 ZEB2O60315 1214 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 FAM228BP0C875 321 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 DLATP10515 647 aaKnown RBP16.61■□□□□ 0.25
SGCE-205ENST00000437425 CPT1AP50416 773 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 GCNT1Q02742 428 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 MAP2K1Q02750 393 aaPredicted RBP16.61■□□□□ 0.25
SGCE-205ENST00000437425 ZACNQ401N2 412 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 WDR44Q5JSH3 913 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 PAPD7Q5XG87 772 aaKnown RBP16.61■□□□□ 0.25
SGCE-205ENST00000437425 ALKBH5Q6P6C2 394 aaKnown RBP16.61■□□□□ 0.25
SGCE-205ENST00000437425 MTERF4Q7Z6M4 381 aaKnown RBP16.61■□□□□ 0.25
SGCE-205ENST00000437425 BRSK2Q8IWQ3 736 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 ZSWIM2Q8NEG5 633 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 UBE2Q2Q8WVN8 375 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 DHX38Q92620 1227 aaKnown RBP16.61■□□□□ 0.25
SGCE-205ENST00000437425 CGRRF1Q99675 332 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 TCHPQ9BT92 498 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 ANKFY1Q9P2R3 1169 aa16.61■□□□□ 0.25
SGCE-205ENST00000437425 A0A0A6YYK5 440 aaPredicted RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 RCCD1A6NED2 376 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 TNPO2O14787 897 aaKnown RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 CA12O43570 354 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 PRLRP16471 622 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 TNNI1P19237 187 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 NLRP11P59045 1033 aaKnown RBP16.6■□□□□ 0.25
SGCE-205ENST00000437425 PPFIA1Q13136 1202 aa16.6■□□□□ 0.25
SGCE-205ENST00000437425 PRPF4BQ13523 1007 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms