RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 CXCR5P32302 372 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 KPNA1P52294 538 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 UBE3CQ15386 1083 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 PDCD4Q53EL6 469 aaKnown RBP4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 PRR16Q569H4 304 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 GPR158Q5T848 1215 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 ABHD17BQ5VST6 288 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 EFCAB12Q6NXP0 572 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 FBXO42Q6P3S6 717 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 SYT12Q8IV01 421 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 TFAP2CQ92754 450 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 NELL1Q92832 810 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 MRFAP1L1Q96HT8 127 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 DNAJC2Q99543 621 aaKnown RBP4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 PRDM13Q9H4Q3 707 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 DKK2Q9UBU2 259 aa4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 EPN1Q9Y6I3 576 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P31-201ENST00000437242 PRSS38A1L453 326 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 ZNF185O15231 689 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 TGM5O43548 720 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 CLEC2LP0C7M8 214 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 MEF2AQ02078 507 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 FOXI1Q12951 378 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 TP53BP2Q13625 1128 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 BTNL9Q6UXG8 535 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 RNF169Q8NCN4 708 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 PPP2R3BQ9Y5P8 575 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 ZMYM3Q14202 1370 aa4.77□□□□□ -1.65
HMGB1P31-201ENST00000437242 LSP1P33241 339 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 PHC1P78364 1004 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 OCRLQ01968 901 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 SART3Q15020 963 aaKnown RBP4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 ANKS6Q68DC2 871 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 SYNPOQ8N3V7 929 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 BOLLQ8N9W6 283 aaKnown RBP4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 ZNF610Q8N9Z0 462 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 RSAD2Q8WXG1 361 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 ASB10Q8WXI3 467 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 ADAM2Q99965 735 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 WNT8AQ9H1J5 351 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 KANSL2Q9H9L4 492 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 TMEM260Q9NX78 707 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 RNF181Q9P0P0 153 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 EVLQ9UI08 416 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 MAP3K2Q9Y2U5 619 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 USP15Q9Y4E8 981 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 NUMBLQ9Y6R0 609 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 FPGT-TNNI3KV9GXZ4 949 aa4.76□□□□□ -1.65
HMGB1P31-201ENST00000437242 LCHNA4D1U4 455 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 TBKBP1A7MCY6 615 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 ITGA10O75578 1167 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 SPDEFO95238 335 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 C1RP00736 705 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 ITGAMP11215 1152 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 PLA2G5P39877 138 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 ELLP55199 621 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 MPP3Q13368 585 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 PDZD4Q76G19 769 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 SLC44A3Q8N4M1 653 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 SIMC1Q8NDZ2 872 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 OR14C36Q8NHC7 312 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 ZFP28Q8NHY6 868 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 MDM1Q8TC05 714 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 SLC9A6Q92581 669 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 GPR101Q96P66 508 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 MS4A5Q9H3V2 200 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 PRSS50Q9UI38 385 aa4.75□□□□□ -1.65
HMGB1P31-201ENST00000437242 MARCH11A6NNE9 402 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 ESRRBO95718 433 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 POU3F2P20265 443 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 PTH2RP49190 550 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 MANFP55145 182 aaKnown RBP4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 RESTQ13127 1097 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 C19orf54Q5BKX5 351 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 FAM102AQ5T9C2 384 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 ARMC6Q6NXE6 501 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 CNNM4Q6P4Q7 775 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 LRRTM3Q86VH5 581 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 SMC1BQ8NDV3 1235 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 SNX33Q8WV41 574 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 SPATA5L1Q9BVQ7 753 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 ANO3Q9BYT9 981 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 KCNG1Q9UIX4 513 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 TLK1Q9UKI8 766 aa4.74□□□□□ -1.65
HMGB1P31-201ENST00000437242 KDM1AO60341 852 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 RAB11FIP3O75154 756 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 TMEM127O75204 238 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 CDKL5O76039 1030 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 FOSP01100 380 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 EGR2P11161 476 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 IL2P60568 153 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 TERF2Q15554 542 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 TCEA2Q15560 299 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 BMT2Q1RMZ1 405 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 ABHD15Q6UXT9 468 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 FRMD7Q6ZUT3 714 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 C11orf74Q86VG3 221 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 CAGE1Q8TC20 777 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 ZNF480Q8WV37 535 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms