RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 C9orf50Q5SZB4 431 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 PRPF38BQ5VTL8 546 aaKnown RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 ARMCX5Q6P1M9 558 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 RBM43Q6ZSC3 357 aaKnown RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 MRPL10Q7Z7H8 261 aaKnown RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 SMYD4Q8IYR2 804 aaPredicted RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 ZBTB45Q96K62 511 aaPredicted RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 ZBED2Q9BTP6 218 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 MSTO1Q9BUK6 570 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 CCDC94Q9BW85 323 aaPredicted RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 CDT1Q9H211 546 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 CXXC1Q9P0U4 656 aaPredicted RBP16.09■□□□□ 0.17
SKA2-202ENST00000437036 DACH1Q9UI36 760 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 IPPQ9Y573 584 aa16.09■□□□□ 0.17
SKA2-202ENST00000437036 TNRC18O15417 2968 aaPredicted RBP16.08■□□□□ 0.17
SKA2-202ENST00000437036 A0A0B4J269 797 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 PDXKO00764 312 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 UPP2O95045 317 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 ATP2A2P16615 1042 aaKnown RBP16.08■□□□□ 0.16
SKA2-202ENST00000437036 HOXD13P35453 343 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 RASIP1Q5U651 963 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 TDHQ8IZJ6 230 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 ABI1Q8IZP0 508 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 ADSSL1Q8N142 457 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 MLKLQ8NB16 471 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 TOP1MTQ969P6 601 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 DHTKD1Q96HY7 919 aaPredicted RBP16.08■□□□□ 0.16
SKA2-202ENST00000437036 TSG101Q99816 390 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 AGPAT3Q9NRZ7 376 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 AGO2Q9UKV8 859 aaKnown RBP16.08■□□□□ 0.16
SKA2-202ENST00000437036 STYXL1Q9Y6J8 313 aa16.08■□□□□ 0.16
SKA2-202ENST00000437036 OGTO15294 1046 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 LDHAP00338 332 aaKnown RBP16.07■□□□□ 0.16
SKA2-202ENST00000437036 GRM5P41594 1212 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
SKA2-202ENST00000437036 NLRP12P59046 1061 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 DEFB103AP81534 67 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 SLC39A4Q6P5W5 647 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 THNSL1Q8IYQ7 743 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 RSPH1Q8WYR4 309 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 APOL6Q9BWW8 343 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 KCTD10Q9H3F6 313 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 TOPORSQ9NS56 1045 aaPredicted RBP16.07■□□□□ 0.16
SKA2-202ENST00000437036 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 GIT1Q9Y2X7 761 aa16.07■□□□□ 0.16
SKA2-202ENST00000437036 ZMYM2Q9UBW7 1377 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 A0A1W2PPC1 479 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 BICDL2A1A5D9 508 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 ABLIM1O14639 778 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 TGFB1I1O43294 461 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 CLTAP09496 248 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 RPL13P26373 211 aaKnown RBP16.06■□□□□ 0.16
SKA2-202ENST00000437036 KLHL10Q6JEL2 608 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 GLB1LQ6UWU2 654 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 ZNF598Q86UK7 904 aaKnown RBP16.06■□□□□ 0.16
SKA2-202ENST00000437036 HERC6Q8IVU3 1022 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 C12orf56Q8IXR9 622 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 SMG8Q8ND04 991 aaKnown RBP16.06■□□□□ 0.16
SKA2-202ENST00000437036 ACAP3Q96P50 834 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 IKZF4Q9H2S9 585 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 NXF3Q9H4D5 531 aaKnown RBP16.06■□□□□ 0.16
SKA2-202ENST00000437036 RSAD1Q9HA92 442 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 ANO10Q9NW15 660 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 SNTG2Q9NY99 539 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 TRAF3IP3Q9Y228 551 aa16.06■□□□□ 0.16
SKA2-202ENST00000437036 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.05■□□□□ 0.16
SKA2-202ENST00000437036 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.05■□□□□ 0.16
SKA2-202ENST00000437036 PPP1R3GB7ZBB8 358 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 TISP43B9A030 160 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 CLIC2O15247 247 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 GJB5O95377 273 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 ATF7P17544 494 aaPredicted RBP16.05■□□□□ 0.16
SKA2-202ENST00000437036 BMP6P22004 513 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 CCNE1P24864 410 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 ADSSP30520 456 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 CYP2J2P51589 502 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 LRRC63Q05C16 580 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 MYBPC2Q14324 1141 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 STX1AQ16623 288 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 CT47A1Q5JQC4 288 aaPredicted RBP16.05■□□□□ 0.16
SKA2-202ENST00000437036 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 URGCPQ8TCY9 931 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 NOC3LQ8WTT2 800 aaKnown RBP16.05■□□□□ 0.16
SKA2-202ENST00000437036 LPPQ93052 612 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 P2RX5Q93086 422 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 YME1L1Q96TA2 773 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 PRO3102Q9H379 93 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 PCIF1Q9H4Z3 704 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 RPF1Q9H9Y2 349 aaKnown RBP16.05■□□□□ 0.16
SKA2-202ENST00000437036 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 HES2Q9Y543 173 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 INSL6Q9Y581 213 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 MICAL3Q7RTP6 2002 aa16.05■□□□□ 0.16
SKA2-202ENST00000437036 TLL1O43897 1013 aa16.04■□□□□ 0.16
SKA2-202ENST00000437036 EXTL3O43909 919 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms