RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PRDM13Q9H4Q3 707 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 CYP4F11Q9HBI6 524 aa5.56□□□□□ -1.52
PTPN4-205ENST00000433888 EPN1Q9Y6I3 576 aaPredicted RBP5.56□□□□□ -1.52
PTPN4-205ENST00000433888 TBKBP1A7MCY6 615 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 DIRC3C9JPN6 131 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 ZNF185O15231 689 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 NDUFA10O95299 355 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 HSP90B1P14625 803 aaKnown RBP5.55□□□□□ -1.52
PTPN4-205ENST00000433888 IL12RB1P42701 662 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 RNASE9P60153 205 aaKnown RBP5.55□□□□□ -1.52
PTPN4-205ENST00000433888 NHLH2Q02577 135 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 PPARAQ07869 468 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 FRMD7Q6ZUT3 714 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 GLB1L2Q8IW92 636 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 SNX33Q8WV41 574 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 LINC00476Q8WZB0 136 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 ADAM2Q99965 735 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 TARS2Q9BW92 718 aaKnown RBP5.55□□□□□ -1.52
PTPN4-205ENST00000433888 SPON1Q9HCB6 807 aa5.55□□□□□ -1.52
PTPN4-205ENST00000433888 FKBP9O95302 570 aa5.54□□□□□ -1.52
PTPN4-205ENST00000433888 SCNN1BP51168 640 aa5.54□□□□□ -1.52
PTPN4-205ENST00000433888 OCRLQ01968 901 aa5.54□□□□□ -1.52
PTPN4-205ENST00000433888 MEF2AQ02078 507 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-205ENST00000433888 BMT2Q1RMZ1 405 aa5.54□□□□□ -1.52
PTPN4-205ENST00000433888 PDCD4Q53EL6 469 aaKnown RBP5.54□□□□□ -1.52
PTPN4-205ENST00000433888 FAM102AQ5T9C2 384 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-205ENST00000433888 FKBP9P1Q75LS8 142 aa5.54□□□□□ -1.52
PTPN4-205ENST00000433888 DHX37Q8IY37 1157 aaKnown RBP5.54□□□□□ -1.52
PTPN4-205ENST00000433888 PPM1KQ8N3J5 372 aa5.54□□□□□ -1.52
PTPN4-205ENST00000433888 ALG13Q9NP73 1137 aaKnown RBP5.54□□□□□ -1.52
PTPN4-205ENST00000433888 PIPSLA2A3N6 862 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 KIAA0355O15063 1070 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 CLEC2LP0C7M8 214 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 TYRP1P17643 537 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 FOXI1Q12951 378 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 PITRM1Q5JRX3 1037 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 COLEC12Q5KU26 742 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 BROXQ5VW32 411 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 ADGRG3Q86Y34 549 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 PLXDC1Q8IUK5 500 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 NIM1KQ8IY84 436 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 AHI1Q8N157 1196 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 OR10H5Q8NGA6 315 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 OR14C36Q8NHC7 312 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 APPBP2Q92624 585 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 CEP95Q96GE4 821 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 COQ10AQ96MF6 247 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 EMC7Q9NPA0 242 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 FANCLQ9NW38 375 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 PTGFRNQ9P2B2 879 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 CDY2AQ9Y6F7 541 aa5.53□□□□□ -1.52
PTPN4-205ENST00000433888 MARCH11A6NNE9 402 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 B5MCH6 92 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 ITGA10O75578 1167 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 CTSSP25774 331 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 SEC24CP53992 1094 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 USP14P54578 494 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 DALRD3Q5D0E6 543 aaKnown RBP5.52□□□□□ -1.53
PTPN4-205ENST00000433888 RASSF3Q86WH2 238 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 CPEB3Q8NE35 698 aaKnown RBP5.52□□□□□ -1.53
PTPN4-205ENST00000433888 CDC5LQ99459 802 aaKnown RBP5.52□□□□□ -1.53
PTPN4-205ENST00000433888 NEU1Q99519 415 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTPN4-205ENST00000433888 COX11Q9Y6N1 276 aa5.52□□□□□ -1.53
PTPN4-205ENST00000433888 KDM1AO60341 852 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 GASTP01350 101 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 RBP3P10745 1247 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 C21orf58P58505 322 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 SART3Q15020 963 aaKnown RBP5.51□□□□□ -1.53
PTPN4-205ENST00000433888 PDCD1Q15116 288 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 MFSD14BQ5SR56 506 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 EFCAB12Q6NXP0 572 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 LCORLQ8N3X6 602 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 SUPT20HQ8NEM7 779 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 OR2W6PQ8NHA6 318 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 MDM1Q8TC05 714 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 UBXN4Q92575 508 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 DRC1Q96MC2 740 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 GPRC5DQ9NZD1 345 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 KCNG1Q9UIX4 513 aa5.51□□□□□ -1.53
PTPN4-205ENST00000433888 ARHGEF17Q96PE2 2063 aaPredicted RBP5.51□□□□□ -1.53
PTPN4-205ENST00000433888 GSG1L2A8MUP6 293 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 PRAMEF4O60810 478 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 LPLP06858 475 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 EGR2P11161 476 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-205ENST00000433888 MGAT1P26572 445 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 IL2P60568 153 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 GUCY1B3Q02153 619 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 TP53BP2Q13625 1128 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 PRR16Q569H4 304 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 CT83Q5H943 113 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 STRIP1Q5VSL9 837 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 CMTR2Q8IYT2 770 aaKnown RBP5.5□□□□□ -1.53
PTPN4-205ENST00000433888 FAM98AQ8NCA5 519 aaKnown RBP5.5□□□□□ -1.53
PTPN4-205ENST00000433888 RNF169Q8NCN4 708 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 SLC5A5Q92911 643 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 R3HDMLQ9H3Y0 253 aa5.5□□□□□ -1.53
PTPN4-205ENST00000433888 A0A087X0B3 334 aa5.49□□□□□ -1.53
PTPN4-205ENST00000433888 UNC119BA6NIH7 251 aa5.49□□□□□ -1.53
PTPN4-205ENST00000433888 DRGXA6NNA5 263 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms