RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 SYNGAP1Q96PV0 1343 aa11.35□□□□□ -0.59
SMPD4-206ENST00000433118 FAM187AA6NFU0 413 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 VWA5AO00534 786 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 ZBED4O75132 1171 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 PAEPP09466 180 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
SMPD4-206ENST00000433118 TRAF1Q13077 416 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 PLCB4Q15147 1175 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 NACC1Q96RE7 527 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 FIZ1Q96SL8 496 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 MXRA8Q9BRK3 442 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 OSBPL7Q9BZF2 842 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 PABPC3Q9H361 631 aaKnown RBP11.34□□□□□ -0.59
SMPD4-206ENST00000433118 PCIF1Q9H4Z3 704 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-206ENST00000433118 KLC4Q9NSK0 619 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 ZDHHC18Q9NUE0 388 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 CHORDC1Q9UHD1 332 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-206ENST00000433118 UBE4BO95155 1302 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 ATP9AO75110 1047 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 FTLP02792 175 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-206ENST00000433118 CLUL1Q15846 466 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 ZNF746Q6NUN9 644 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-206ENST00000433118 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 UHMK1Q8TAS1 419 aaKnown RBP11.34□□□□□ -0.59
SMPD4-206ENST00000433118 KRT35Q92764 455 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 TATDN2Q93075 761 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 EHMT1Q9H9B1 1298 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 ARHGEF35A5YM69 484 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 K7ENM7 598 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 MARCKSL1P49006 195 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 SMTNP53814 917 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 DLG4P78352 724 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 CETN1Q12798 172 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 SF3A3Q12874 501 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■■□ 22.7
SMPD4-206ENST00000433118 PPP2R5CQ13362 524 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 KIF22Q14807 665 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 SLC5A5Q92911 643 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 TLCD1Q96CP7 247 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 CHMP6Q96FZ7 201 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 TEKT3Q9BXF9 490 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 TXLNGYQ9BZA5 131 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 SLC40A1Q9NP59 571 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■■■ 118.5
SMPD4-206ENST00000433118 DMAC2Q9NW81 257 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 ODF2LQ9ULJ1 636 aa11.34□□□□□ -0.59
SMPD4-206ENST00000433118 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 KIAA0391O15091 583 aaKnown RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 RGS16O15492 202 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 PHF2O75151 1096 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 ZNF131P52739 623 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 SLC29A2Q14542 456 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 MESDQ14696 234 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 SPRED3Q2MJR0 410 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 SPDYCQ5MJ68 293 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 MIER3Q7Z3K6 550 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 CCDC91Q7Z6B0 441 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 KLRG1Q96E93 195 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 XPO6Q96QU8 1125 aaKnown RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 JPH2Q9BR39 696 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 TELO2Q9Y4R8 837 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 MIF4GDA9UHW6 222 aaKnown RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 DNM1LO00429 736 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 HIP1RO75146 1068 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 MMEP08473 750 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 CHN1P15882 459 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 HSD17B4P51659 736 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 MTMR1Q13613 665 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 ANKRD20A8PQ5CZ79 823 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 SEL1L2Q5TEA6 688 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 APOBEC3FQ8IUX4 373 aaKnown RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 RPUSD2Q8IZ73 545 aaKnown RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 AZI2Q9H6S1 392 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 SPON1Q9HCB6 807 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 CD248Q9HCU0 757 aa11.33□□□□□ -0.6
SMPD4-206ENST00000433118 MTRF1LQ9UGC7 380 aaKnown RBP11.33□□□□□ -0.6
SMPD4-206ENST00000433118 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
SMPD4-206ENST00000433118 LTBP3Q9NS15 1303 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 C5orf60A6NFR6 353 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 PLA2G6O60733 806 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 NUDT17P0C025 328 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 RFX1P22670 979 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 CHRNA3P32297 505 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
SMPD4-206ENST00000433118 GCLMP48507 274 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 TKFCQ3LXA3 575 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 CCDC137Q6PK04 289 aaKnown RBP11.32□□□□□ -0.6
SMPD4-206ENST00000433118 ZDHHC24Q6UX98 284 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 GPC2Q8N158 579 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-206ENST00000433118 CCDC113Q9H0I3 377 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 EPB41L4BQ9H329 900 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 TCEAL9Q9UHQ7 104 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
SMPD4-206ENST00000433118 TISP43B9A030 160 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms